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    Luc7l3 LUC7 like 3 pre-mRNA splicing factor [ Heterocephalus glaber (naked mole-rat) ]

    Gene ID: 101719667, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Luc7l3
    Gene description
    LUC7 like 3 pre-mRNA splicing factor
    See related
    Ensembl:ENSHGLG00000010417
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Heterocephalus glaber
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
    Orthologs
    human mouse all
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    Genomic context

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    See Luc7l3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624795.1 (6583004..6622540)

    NW_004624795.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily C member 3 Neighboring gene ankyrin repeat domain 40 Neighboring gene V-type proton ATPase subunit G 1 pseudogene Neighboring gene WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 Neighboring gene bcl-2-binding component 3-like Neighboring gene transducer of ERBB2, 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004624795 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splice site recognition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U1 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U2-type prespliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    luc7-like protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HetGla_female_1.0 Primary Assembly

    Genomic

    1. NW_004624795.1 Reference HetGla_female_1.0 Primary Assembly

      Range
      6583004..6622540
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021239904.1 → XP_021095563.1  luc7-like protein 3 isoform X6

      Conserved Domains (1) summary
      pfam03194
      Location:4 → 173
      LUC7; LUC7 N_terminus

    2. XM_021239905.1 → XP_021095564.1  luc7-like protein 3 isoform X7

      Conserved Domains (1) summary
      pfam03194
      Location:4 → 182
      LUC7; LUC7 N_terminus

    3. XM_021239900.1 → XP_021095559.1  luc7-like protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A0P6J5E0
      Related
      ENSHGLP00000014549.1, ENSHGLT00000014694.1
      Conserved Domains (1) summary
      pfam03194
      Location:4 → 244
      LUC7; LUC7 N_terminus

    4. XM_013077731.2 → XP_012933185.1  luc7-like protein 3 isoform X1

      Conserved Domains (2) summary
      COG5200
      Location:4 → 244
      LUC7; U1 snRNP component, mediates U1 snRNP association with cap-binding complex [RNA processing and modification]
      pfam03194
      Location:4 → 240
      LUC7; LUC7 N_terminus

    5. XM_021239902.1 → XP_021095561.1  luc7-like protein 3 isoform X4

      Conserved Domains (1) summary
      pfam03194
      Location:4 → 244
      LUC7; LUC7 N_terminus

    6. XM_021239903.1 → XP_021095562.1  luc7-like protein 3 isoform X4

      Conserved Domains (1) summary
      pfam03194
      Location:4 → 244
      LUC7; LUC7 N_terminus

    7. XM_021239901.1 → XP_021095560.1  luc7-like protein 3 isoform X3

      Related
      ENSHGLP00000014548.1, ENSHGLT00000014693.1
      Conserved Domains (1) summary
      pfam03194
      Location:4 → 244
      LUC7; LUC7 N_terminus

    8. XM_013077732.2 → XP_012933186.1  luc7-like protein 3 isoform X5

      UniProtKB/TrEMBL
      A0A0P6J5E0
      Conserved Domains (2) summary
      COG5200
      Location:4 → 244
      LUC7; U1 snRNP component, mediates U1 snRNP association with cap-binding complex [RNA processing and modification]
      pfam03194
      Location:4 → 240
      LUC7; LUC7 N_terminus

    RNA

    1. XR_002387577.1 RNA Sequence

    2. XR_002387576.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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