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    Trim24 tripartite motif containing 24 [ Heterocephalus glaber (naked mole-rat) ]

    Gene ID: 101717311, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Trim24
    Gene description
    tripartite motif containing 24
    See related
    Ensembl:ENSHGLG00000005195
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Heterocephalus glaber
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624765.1 (18966663..19079857)

    NW_004624765.1Genomic Context describing neighboring genes Neighboring gene cAMP responsive element binding protein 3 like 2 Neighboring gene 40S ribosomal protein S15a pseudogene Neighboring gene aldo-keto reductase family 1 member D1 Neighboring gene SVOP like Neighboring gene ATPase H+ transporting V0 subunit a4 Neighboring gene transmembrane protein 213

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004624765 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription intermediary factor 1-alpha

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HetGla_female_1.0 Primary Assembly

    Genomic

    1. NW_004624765.1 Reference HetGla_female_1.0 Primary Assembly

      Range
      18966663..19079857
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021263652.1 → XP_021119311.1  transcription intermediary factor 1-alpha isoform X1

      UniProtKB/TrEMBL
      G5B547
      Related
      ENSHGLP00000007116.1, ENSHGLT00000007201.1
      Conserved Domains (7) summary
      cd05502
      Location:841 → 948
      Bromo_tif1_like; Bromodomain; tif1_like subfamily. Tif1 (transcription intermediary factor 1) is a member of the tripartite motif (TRIM) protein family, which is characterized by a particular domain architecture. It functions by recruiting coactivators and/or ...
      smart00502
      Location:207 → 333
      BBC; B-Box C-terminal domain
      smart00336
      Location:99 → 135
      BBOX; B-Box-type zinc finger
      cd00021
      Location:162 → 200
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      cd15622
      Location:769 → 811
      PHD_TIF1alpha; PHD finger found in transcription intermediary factor 1-alpha (TIF1-alpha)
      cl17238
      Location:52 → 75
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
      cl25716
      Location:431 → 504
      Amelogenin

    2. XM_021263653.1 → XP_021119312.1  transcription intermediary factor 1-alpha isoform X2

      UniProtKB/TrEMBL
      G5B547
      Related
      ENSHGLP00000007117.1, ENSHGLT00000007202.1
      Conserved Domains (6) summary
      cd05502
      Location:807 → 914
      Bromo_tif1_like; Bromodomain; tif1_like subfamily. Tif1 (transcription intermediary factor 1) is a member of the tripartite motif (TRIM) protein family, which is characterized by a particular domain architecture. It functions by recruiting coactivators and/or ...
      smart00502
      Location:207 → 333
      BBC; B-Box C-terminal domain
      smart00336
      Location:99 → 135
      BBOX; B-Box-type zinc finger
      cd00021
      Location:162 → 200
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      cd15622
      Location:735 → 777
      PHD_TIF1alpha; PHD finger found in transcription intermediary factor 1-alpha (TIF1-alpha)
      cl17238
      Location:52 → 75
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    Nucleotide Protein
    Heading Accession and Version

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