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    Ydjc YdjC chitooligosaccharide deacetylase homolog [ Heterocephalus glaber (naked mole-rat) ]

    Gene ID: 101703452, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Ydjc
    Gene description
    YdjC chitooligosaccharide deacetylase homolog
    Locus tag
    GW7_15357
    See related
    Ensembl:ENSHGLG00000008289
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Heterocephalus glaber
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624747.1 (1181617..1183581, complement)

    NW_004624747.1Genomic Context describing neighboring genes Neighboring gene RIMS binding protein 3C Neighboring gene ubiquitin conjugating enzyme E2 L3 Neighboring gene coiled-coil domain containing 116 Neighboring gene stromal cell derived factor 2 like 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004624747 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables deacetylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    carbohydrate deacetylase
    Names
    UPF0249 protein ydjC homolog
    YdjC homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HetGla_female_1.0 Primary Assembly

    Genomic

    1. NW_004624747.1 Reference HetGla_female_1.0 Primary Assembly

      Range
      1181617..1183581 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004843313.3 → XP_004843370.1  carbohydrate deacetylase

      See identical proteins and their annotated locations for XP_004843370.1

      UniProtKB/TrEMBL
      G5BKG7
      Related
      ENSHGLP00000011557.1, ENSHGLT00000011684.1
      Conserved Domains (1) summary
      cd10806
      Location:7 → 286
      YdjC_like_2; uncharacterized YdjC-like family proteins from eukaryotes
    Nucleotide Protein
    Heading Accession and Version

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