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    Ca5b carbonic anhydrase 5B [ Heterocephalus glaber (naked mole-rat) ]

    Gene ID: 101698460, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Ca5b
    Gene description
    carbonic anhydrase 5B
    Locus tag
    GW7_13534
    See related
    Ensembl:ENSHGLG00000002904
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Heterocephalus glaber
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624829.1 (455731..572603)

    NW_004624829.1Genomic Context describing neighboring genes Neighboring gene angiotensin converting enzyme 2 Neighboring gene vegetative cell wall protein gp1-like Neighboring gene collectrin, amino acid transport regulator Neighboring gene ribose-phosphate pyrophosphokinase 1-like Neighboring gene zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 Neighboring gene adaptor related protein complex 1 subunit sigma 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004624829 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbonate dehydratase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    carbonic anhydrase 5B, mitochondrial
    Names
    Carbonic anhydrase 5B, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HetGla_female_1.0 Primary Assembly

    Genomic

    1. NW_004624829.1 Reference HetGla_female_1.0 Primary Assembly

      Range
      455731..572603
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004866104.3 → XP_004866161.1  carbonic anhydrase 5B, mitochondrial isoform X1

      See identical proteins and their annotated locations for XP_004866161.1

      UniProtKB/TrEMBL
      G5ARI0
      Conserved Domains (1) summary
      cl00012
      Location:61 → 296
      alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...

    2. XM_021245307.1 → XP_021100966.1  carbonic anhydrase 5B, mitochondrial isoform X2

    3. XM_004866102.3 → XP_004866159.1  carbonic anhydrase 5B, mitochondrial isoform X1

      See identical proteins and their annotated locations for XP_004866159.1

      UniProtKB/TrEMBL
      G5ARI0
      Conserved Domains (1) summary
      cl00012
      Location:61 → 296
      alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...

    4. XM_004866103.3 → XP_004866160.1  carbonic anhydrase 5B, mitochondrial isoform X1

      See identical proteins and their annotated locations for XP_004866160.1

      UniProtKB/TrEMBL
      G5ARI0
      Conserved Domains (1) summary
      cl00012
      Location:61 → 296
      alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...

    5. XM_004866101.3 → XP_004866158.1  carbonic anhydrase 5B, mitochondrial isoform X1

      See identical proteins and their annotated locations for XP_004866158.1

      UniProtKB/TrEMBL
      G5ARI0
      Related
      ENSHGLP00000003942.1, ENSHGLT00000004000.1
      Conserved Domains (1) summary
      cl00012
      Location:61 → 296
      alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...

    6. XM_004866107.3 → XP_004866164.1  carbonic anhydrase 5B, mitochondrial isoform X1

      See identical proteins and their annotated locations for XP_004866164.1

      UniProtKB/TrEMBL
      G5ARI0
      Conserved Domains (1) summary
      cl00012
      Location:61 → 296
      alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...

    7. XM_004866105.3 → XP_004866162.1  carbonic anhydrase 5B, mitochondrial isoform X1

      See identical proteins and their annotated locations for XP_004866162.1

      UniProtKB/TrEMBL
      G5ARI0
      Conserved Domains (1) summary
      cl00012
      Location:61 → 296
      alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...

    8. XM_004866106.3 → XP_004866163.1  carbonic anhydrase 5B, mitochondrial isoform X1

      See identical proteins and their annotated locations for XP_004866163.1

      UniProtKB/TrEMBL
      G5ARI0
      Related
      ENSHGLP00000003943.1, ENSHGLT00000004001.1
      Conserved Domains (1) summary
      cl00012
      Location:61 → 296
      alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...

    9. XM_021245305.1 → XP_021100964.1  carbonic anhydrase 5B, mitochondrial isoform X1

      UniProtKB/TrEMBL
      G5ARI0
      Conserved Domains (1) summary
      cl00012
      Location:61 → 296
      alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
    Nucleotide Protein
    Heading Accession and Version

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