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    Uchl5 ubiquitin C-terminal hydrolase L5 [ Heterocephalus glaber (naked mole-rat) ]

    Gene ID: 101696695, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Uchl5
    Gene description
    ubiquitin C-terminal hydrolase L5
    See related
    Ensembl:ENSHGLG00000003407
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Heterocephalus glaber
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
    Orthologs
    human mouse all
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    Genomic context

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    See Uchl5 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624814.1 (529100..568387)

    NW_004624814.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 73 Neighboring gene beta-1,3-galactosyltransferase 2 Neighboring gene glutaredoxin 2 Neighboring gene Ro60, Y RNA binding protein Neighboring gene uncharacterized LOC106010912 Neighboring gene 40S ribosomal protein S12 pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004624814 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables proteasome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Ino80 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin carboxyl-terminal hydrolase isozyme L5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HetGla_female_1.0 Primary Assembly

    Genomic

    1. NW_004624814.1 Reference HetGla_female_1.0 Primary Assembly

      Range
      529100..568387
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004862762.3 → XP_004862819.1  ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1

      See identical proteins and their annotated locations for XP_004862819.1

      UniProtKB/TrEMBL
      G5ASG5
      Related
      ENSHGLP00000004658.1, ENSHGLT00000004720.1
      Conserved Domains (2) summary
      cd02255
      Location:8 → 223
      Peptidase_C12; Cysteine peptidase C12 contains ubiquitin carboxyl-terminal hydrolase (UCH) families L1, L3, L5 and BAP1
      pfam18031
      Location:264 → 309
      UCH_C; Ubiquitin carboxyl-terminal hydrolases

    2. XM_004862761.3 → XP_004862818.1  ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X2

      See identical proteins and their annotated locations for XP_004862818.1

      UniProtKB/TrEMBL
      G5ASG5
      Conserved Domains (2) summary
      cd02255
      Location:8 → 223
      Peptidase_C12; Cysteine peptidase C12 contains ubiquitin carboxyl-terminal hydrolase (UCH) families L1, L3, L5 and BAP1
      pfam18031
      Location:263 → 308
      UCH_C; Ubiquitin carboxyl-terminal hydrolases
    Nucleotide Protein
    Heading Accession and Version

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