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    LOC101123619 cyclic AMP-dependent transcription factor ATF-7 [ Ovis aries (sheep) ]

    Gene ID: 101123619, updated on 3-Apr-2024

    Summary

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    Gene symbol
    LOC101123619
    Gene description
    cyclic AMP-dependent transcription factor ATF-7
    See related
    EnsemblRapid:ENSOARG00020018598
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Also known as
    ATF7
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 3 NC_056056.1 (132904710..133001249)

    Chromosome 3 - NC_056056.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114113972 Neighboring gene large ribosomal subunit protein eL19-like Neighboring gene ATP synthase membrane subunit c locus 2 Neighboring gene neuropeptide FF-amide peptide precursor Neighboring gene TARBP2 subunit of RISC loading complex Neighboring gene mitogen-activated protein kinase kinase kinase 12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056056.1 Chromosome 3 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cAMP response element binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclic AMP-dependent transcription factor ATF-7
    Names
    activating transcription factor 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056056.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      132904710..133001249
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_060412535.1 → XP_060268518.1  cyclic AMP-dependent transcription factor ATF-7 isoform X1

    2. XM_012174150.5 → XP_012029540.2  cyclic AMP-dependent transcription factor ATF-7 isoform X1

      UniProtKB/TrEMBL
      W5Q4I3
      Related
      ENSOARP00020057479.1, ENSOART00020048593.1
      Conserved Domains (3) summary
      cd12192
      Location:47 → 84
      GCN4_cent; GCN4 central activation domain-like acidic activation domain
      cd14687
      Location:334 → 394
      bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
      sd00019
      Location:9 → 31
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_012174149.5 → XP_012029539.2  cyclic AMP-dependent transcription factor ATF-7 isoform X1

      UniProtKB/TrEMBL
      W5Q4I3
      Related
      ENSOARP00020039790.1, ENSOART00020063159.1
      Conserved Domains (3) summary
      cd12192
      Location:47 → 84
      GCN4_cent; GCN4 central activation domain-like acidic activation domain
      cd14687
      Location:334 → 394
      bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
      sd00019
      Location:9 → 31
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_060412536.1 → XP_060268519.1  cyclic AMP-dependent transcription factor ATF-7 isoform X2

    5. XM_004006288.6 → XP_004006337.2  cyclic AMP-dependent transcription factor ATF-7 isoform X1

      UniProtKB/TrEMBL
      W5Q4I3
      Related
      ENSOARP00020023893.2, ENSOART00020028857.2
      Conserved Domains (3) summary
      cd12192
      Location:47 → 84
      GCN4_cent; GCN4 central activation domain-like acidic activation domain
      cd14687
      Location:334 → 394
      bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
      sd00019
      Location:9 → 31
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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