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    ASTN2 astrotactin 2 [ Ovis aries (sheep) ]

    Gene ID: 101123440, updated on 3-Apr-2024

    Summary

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    Gene symbol
    ASTN2
    Gene description
    astrotactin 2
    See related
    EnsemblRapid:ENSOARG00020004561
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 2 NC_056055.1 (6272406..7305276)

    Chromosome 2 - NC_056055.1Genomic Context describing neighboring genes Neighboring gene elongation factor 1-alpha 1 Neighboring gene toll like receptor 4 Neighboring gene uncharacterized LOC114112921 Neighboring gene tripartite motif containing 32 Neighboring gene pappalysin 1 Neighboring gene uncharacterized LOC121818526

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056055.1 Chromosome 2 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in neuron cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    astrotactin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056055.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      6272406..7305276
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042242803.2 → XP_042098737.1  astrotactin-2 isoform X1

      UniProtKB/TrEMBL
      A0A836D512
      Related
      ENSOARP00020006165.2, ENSOART00020007451.2
      Conserved Domains (2) summary
      smart00457
      Location:837 → 1020
      MACPF; membrane-attack complex / perforin
      cd00063
      Location:1051 → 1173
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

    2. XM_027964073.3 → XP_027819874.2  astrotactin-2 isoform X2

      UniProtKB/TrEMBL
      A0A836D512
      Conserved Domains (2) summary
      smart00457
      Location:833 → 1016
      MACPF; membrane-attack complex / perforin
      cd00063
      Location:1047 → 1169
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

    3. XM_060410801.1 → XP_060266784.1  astrotactin-2 isoform X3

      Related
      ENSOARP00020006201.2, ENSOART00020007497.2
    Nucleotide Protein Strain
    Heading Accession and Version

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