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    EED embryonic ectoderm development [ Ovis aries (sheep) ]

    Gene ID: 101113712, updated on 8-Mar-2024

    Summary

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    Gene symbol
    EED
    Gene description
    embryonic ectoderm development
    See related
    EnsemblRapid:ENSOARG00020012861
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 21
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 21 NC_056074.1 (8788418..8819603, complement)

    Chromosome 21 - NC_056074.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 81 Neighboring gene heat shock protein nuclear import factor hikeshi Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene uncharacterized LOC132658338 Neighboring gene phosphatidylinositol binding clathrin assembly protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056074.1 Chromosome 21 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ESC/E(Z) complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polycomb protein EED

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056074.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      8788418..8819603 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015103070.3 → XP_014958556.1  polycomb protein EED isoform X2

      UniProtKB/TrEMBL
      A0A835ZUB5
      Related
      ENSOARP00020017113.2, ENSOART00020020671.2
      Conserved Domains (3) summary
      COG2319
      Location:79 → 440
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:96 → 140
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:150 → 438
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_015103071.3 → XP_014958557.1  polycomb protein EED isoform X1

      UniProtKB/TrEMBL
      A0A835ZUB5
      Related
      ENSOARP00020017083.1, ENSOART00020020634.2
      Conserved Domains (3) summary
      COG2319
      Location:79 → 465
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:96 → 140
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:150 → 463
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    3. XM_042238249.2 → XP_042094183.1  polycomb protein EED isoform X3

      Conserved Domains (2) summary
      sd00039
      Location:96 → 140
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:81 → 264
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein Strain
    Heading Accession and Version

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