U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    KATNAL1 katanin catalytic subunit A1 like 1 [ Ovis aries (sheep) ]

    Gene ID: 101112580, updated on 3-Apr-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    KATNAL1
    Gene description
    katanin catalytic subunit A1 like 1
    See related
    EnsemblRapid:ENSOARG00020009464
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 10
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 10 NC_056063.1 (30774849..30832299)

    Chromosome 10 - NC_056063.1Genomic Context describing neighboring genes Neighboring gene PE-PGRS family protein PE_PGRS16-like Neighboring gene uncharacterized LOC132657251 Neighboring gene small nucleolar RNA SNORA70 Neighboring gene uncharacterized LOC121820439

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_056063.1 Chromosome 10 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule severing ATPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule severing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    katanin p60 ATPase-containing subunit A-like 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056063.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      30774849..30832299
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_060394069.1 → XP_060250052.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9

    2. XM_015098149.3 → XP_014953635.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9
      Related
      ENSOARP00020012043.2, ENSOART00020014574.2
      Conserved Domains (3) summary
      pfam09336
      Location:450 → 488
      Vps4_C; Vps4 C terminal oligomerization domain
      pfam17862
      Location:402 → 446
      AAA_lid_3; AAA+ lid domain
      cd19522
      Location:209 → 378
      RecA-like_KTNA1; Katanin p60 ATPase-containing subunit A1

    3. XM_012184638.4 → XP_012040028.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      See identical proteins and their annotated locations for XP_012040028.1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9
      Conserved Domains (3) summary
      pfam09336
      Location:450 → 488
      Vps4_C; Vps4 C terminal oligomerization domain
      pfam17862
      Location:402 → 446
      AAA_lid_3; AAA+ lid domain
      cd19522
      Location:209 → 378
      RecA-like_KTNA1; Katanin p60 ATPase-containing subunit A1

    4. XM_060394070.1 → XP_060250053.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9

    5. XM_060394072.1 → XP_060250055.1  katanin p60 ATPase-containing subunit A-like 1 isoform X2

    6. XM_060394063.1 → XP_060250046.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9

    7. XM_060394068.1 → XP_060250051.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9

    8. XM_060394065.1 → XP_060250048.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9

    9. XM_060394066.1 → XP_060250049.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9

    10. XM_012184637.4 → XP_012040027.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      See identical proteins and their annotated locations for XP_012040027.1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9
      Conserved Domains (3) summary
      pfam09336
      Location:450 → 488
      Vps4_C; Vps4 C terminal oligomerization domain
      pfam17862
      Location:402 → 446
      AAA_lid_3; AAA+ lid domain
      cd19522
      Location:209 → 378
      RecA-like_KTNA1; Katanin p60 ATPase-containing subunit A1

    11. XM_004012145.5 → XP_004012194.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      See identical proteins and their annotated locations for XP_004012194.1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9
      Related
      ENSOARP00020011952.2, ENSOART00020014479.2
      Conserved Domains (3) summary
      pfam09336
      Location:450 → 488
      Vps4_C; Vps4 C terminal oligomerization domain
      pfam17862
      Location:402 → 446
      AAA_lid_3; AAA+ lid domain
      cd19522
      Location:209 → 378
      RecA-like_KTNA1; Katanin p60 ATPase-containing subunit A1

    12. XM_060394064.1 → XP_060250047.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9

    13. XM_042254830.1 → XP_042110764.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9
      Conserved Domains (3) summary
      pfam09336
      Location:450 → 488
      Vps4_C; Vps4 C terminal oligomerization domain
      pfam17862
      Location:402 → 446
      AAA_lid_3; AAA+ lid domain
      cd19522
      Location:209 → 378
      RecA-like_KTNA1; Katanin p60 ATPase-containing subunit A1

    14. XM_060394067.1 → XP_060250050.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9

    15. XM_042254829.1 → XP_042110763.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9
      Conserved Domains (3) summary
      pfam09336
      Location:450 → 488
      Vps4_C; Vps4 C terminal oligomerization domain
      pfam17862
      Location:402 → 446
      AAA_lid_3; AAA+ lid domain
      cd19522
      Location:209 → 378
      RecA-like_KTNA1; Katanin p60 ATPase-containing subunit A1

    16. XM_042254828.1 → XP_042110762.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A6P3TQW1, W5PQQ9
      Conserved Domains (3) summary
      pfam09336
      Location:450 → 488
      Vps4_C; Vps4 C terminal oligomerization domain
      pfam17862
      Location:402 → 446
      AAA_lid_3; AAA+ lid domain
      cd19522
      Location:209 → 378
      RecA-like_KTNA1; Katanin p60 ATPase-containing subunit A1

    17. XM_042254834.2 → XP_042110768.1  katanin p60 ATPase-containing subunit A-like 1 isoform X3

      UniProtKB/TrEMBL
      A0A836A8H3
      Conserved Domains (3) summary
      pfam09336
      Location:351 → 389
      Vps4_C; Vps4 C terminal oligomerization domain
      pfam17862
      Location:303 → 347
      AAA_lid_3; AAA+ lid domain
      cd19522
      Location:110 → 279
      RecA-like_KTNA1; Katanin p60 ATPase-containing subunit A1

    18. XM_042254835.2 → XP_042110769.1  katanin p60 ATPase-containing subunit A-like 1 isoform X4

      UniProtKB/TrEMBL
      A0A836A8H3
      Conserved Domains (1) summary
      COG0464
      Location:62 → 357
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]

    19. XM_060394073.1 → XP_060250056.1  katanin p60 ATPase-containing subunit A-like 1 isoform X3

    RNA

    1. XR_006060970.2 RNA Sequence

    2. XR_009595126.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.