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    SPTSSB serine palmitoyltransferase small subunit B [ Ovis aries (sheep) ]

    Gene ID: 101103775, updated on 8-Mar-2024

    Summary

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    Gene symbol
    SPTSSB
    Gene description
    serine palmitoyltransferase small subunit B
    See related
    EnsemblRapid:ENSOARG00020040938
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Orthologs
    human mouse all
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    Genomic context

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    See SPTSSB in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 1 NC_056054.1 (226714574..226744545)

    Chromosome 1 - NC_056054.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene otolin 1 Neighboring gene uncharacterized LOC121818542 Neighboring gene NMD3 ribosome export adaptor Neighboring gene astrocytic phosphoprotein PEA-15-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056054.1 Chromosome 1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine C-palmitoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ceramide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of serine C-palmitoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of serine C-palmitoyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine palmitoyltransferase small subunit B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056054.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      226714574..226744545
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_060394159.1 → XP_060250142.1  serine palmitoyltransferase small subunit B isoform X1

    2. XM_060394164.1 → XP_060250147.1  serine palmitoyltransferase small subunit B isoform X1

    3. XM_060394165.1 → XP_060250148.1  serine palmitoyltransferase small subunit B isoform X1

      Related
      ENSOARP00020044654.1, ENSOART00020052701.1

    4. XM_042234955.2 → XP_042090889.1  serine palmitoyltransferase small subunit B isoform X1

      Conserved Domains (1) summary
      pfam11779
      Location:35 → 88
      SPT_ssu-like; Small subunit of serine palmitoyltransferase-like

    5. XM_012100182.4 → XP_011955572.2  serine palmitoyltransferase small subunit B isoform X1

      Conserved Domains (1) summary
      pfam11779
      Location:35 → 88
      SPT_ssu-like; Small subunit of serine palmitoyltransferase-like

    6. XM_004003198.5 → XP_004003247.1  serine palmitoyltransferase small subunit B isoform X2

      See identical proteins and their annotated locations for XP_004003247.1

      UniProtKB/TrEMBL
      A0A6P3E887, W5PZT5
      Related
      ENSOARP00020036807.1, ENSOART00020048743.1
      Conserved Domains (1) summary
      pfam11779
      Location:7 → 60
      SPT_ssu-like; Small subunit of serine palmitoyltransferase-like
    Nucleotide Protein Strain
    Heading Accession and Version

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