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    NSFL1C NSFL1 cofactor [ Felis catus (domestic cat) ]

    Gene ID: 101100120, updated on 8-Mar-2024

    Summary

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    Official Symbol
    NSFL1C
    Official Full Name
    NSFL1 cofactor
    Primary source
    VGNC:VGNC:63887
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Felis catus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: A3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) A3 NC_058370.1 (28459929..28482673, complement)
    104 previous assembly Felis_catus_9.0 (GCF_000181335.3) A3 NC_018725.3 (28740328..28762996, complement)

    Chromosome A3 - NC_058370.1Genomic Context describing neighboring genes Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene FKBP prolyl isomerase 1A Neighboring gene uncharacterized LOC102902056 Neighboring gene signal regulatory protein beta 2 Neighboring gene signal-regulatory protein beta-1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequencing and comparative genomic analysis of 1227 Felis catus cDNA sequences enriched for developmental, clinical and nutritional phenotypes. Irizarry KJ, et al. BMC Genomics, 2012 Jan 18. PMID 22257742, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in membrane fusion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nuclear membrane reassembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NSFL1 cofactor p47

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference F.catus_Fca126_mat1.0 Primary Assembly

    Genomic

    1. NC_058370.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

      Range
      28459929..28482673 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023251380.2 → XP_023107148.1  NSFL1 cofactor p47 isoform X2

      UniProtKB/TrEMBL
      M3WHQ6
      Conserved Domains (3) summary
      smart00553
      Location:178 → 270
      SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
      cd14348
      Location:7 → 45
      UBA_p47; UBA-like domain found in NSFL1 cofactor p47 and similar proteins
      cd17162
      Location:289 → 370
      UBX_UBXN2C; Ubiquitin regulatory domain X (UBX) found in NSFL1 cofactor (also known as UBX domain-containing protein 2C (UBXN2C) and similar proteins

    2. XM_023251379.2 → XP_023107147.1  NSFL1 cofactor p47 isoform X1

      UniProtKB/TrEMBL
      A0A337SQ94, M3WHQ6
      Conserved Domains (3) summary
      smart00553
      Location:180 → 272
      SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
      cd14348
      Location:7 → 45
      UBA_p47; UBA-like domain found in NSFL1 cofactor p47 and similar proteins
      cd17162
      Location:291 → 372
      UBX_UBXN2C; Ubiquitin regulatory domain X (UBX) found in NSFL1 cofactor (also known as UBX domain-containing protein 2C (UBXN2C) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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