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    WDR45 WD repeat domain 45 [ Felis catus (domestic cat) ]

    Gene ID: 101100032, updated on 8-Mar-2024

    Summary

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    Official Symbol
    WDR45
    Official Full Name
    WD repeat domain 45
    Primary source
    VGNC:VGNC:67034
    See related
    EnsemblRapid:ENSFCTG00005002842
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Felis catus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: X
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) X NC_058386.1 (42764453..42769743, complement)
    104 previous assembly Felis_catus_9.0 (GCF_000181335.3) X NC_018741.3 (43097613..43102974, complement)

    Chromosome X - NC_058386.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 120 Neighboring gene PRA1 domain family member 2 Neighboring gene G-patch domain and KOW motifs Neighboring gene cytochrome c

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequencing and comparative genomic analysis of 1227 Felis catus cDNA sequences enriched for developmental, clinical and nutritional phenotypes. Irizarry KJ, et al. BMC Genomics, 2012 Jan 18. PMID 22257742, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3,5-bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in autophagy of mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nucleophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein lipidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extrinsic component of membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in phagophore assembly site membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WD repeat domain phosphoinositide-interacting protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference F.catus_Fca126_mat1.0 Primary Assembly

    Genomic

    1. NC_058386.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

      Range
      42764453..42769743 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006943727.4 → XP_006943789.1  WD repeat domain phosphoinositide-interacting protein 4 isoform X3

      UniProtKB/TrEMBL
      M3VYS2
      Conserved Domains (2) summary
      sd00039
      Location:161 → 197
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:152 → 239
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_004000505.5 → XP_004000554.1  WD repeat domain phosphoinositide-interacting protein 4 isoform X2

      See identical proteins and their annotated locations for XP_004000554.1

      Related
      ENSFCTP00005004915.1, ENSFCTT00005007674.1
      Conserved Domains (2) summary
      sd00039
      Location:196 → 232
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:187 → 274
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    3. XM_006943730.5 → XP_006943792.1  WD repeat domain phosphoinositide-interacting protein 4 isoform X6

      UniProtKB/TrEMBL
      A0A337SL11
      Related
      ENSFCTP00005004900.1, ENSFCTT00005007654.1
      Conserved Domains (2) summary
      sd00039
      Location:197 → 233
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:188 → 275
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    4. XM_006943726.5 → XP_006943788.1  WD repeat domain phosphoinositide-interacting protein 4 isoform X1

      See identical proteins and their annotated locations for XP_006943788.1

      UniProtKB/TrEMBL
      A0A2I2UUZ2
      Conserved Domains (2) summary
      sd00039
      Location:197 → 233
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:188 → 275
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    5. XM_019823803.2 → XP_019679362.1  WD repeat domain phosphoinositide-interacting protein 4 isoform X5

      Conserved Domains (2) summary
      sd00039
      Location:131 → 167
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:122 → 209
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    6. XM_045050642.1 → XP_044906577.1  WD repeat domain phosphoinositide-interacting protein 4 isoform X4

      Related
      ENSFCTP00005004886.1, ENSFCTT00005007627.1
      Conserved Domains (2) summary
      sd00039
      Location:132 → 168
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:123 → 210
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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