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    NXF1 nuclear RNA export factor 1 [ Felis catus (domestic cat) ]

    Gene ID: 101092292, updated on 8-Mar-2024

    Summary

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    Official Symbol
    NXF1
    Official Full Name
    nuclear RNA export factor 1
    Primary source
    VGNC:VGNC:68603
    See related
    EnsemblRapid:ENSFCTG00005028293
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Felis catus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: D1
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) D1 NC_058377.1 (106310555..106321063, complement)
    104 previous assembly Felis_catus_9.0 (GCF_000181335.3) D1 NC_018732.3 (108521234..108531762, complement)

    Chromosome D1 - NC_058377.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 179B Neighboring gene transmembrane protein 223 Neighboring gene syntaxin 5 Neighboring gene uncharacterized LOC109492168 Neighboring gene testis-expressed protein 54-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequencing and comparative genomic analysis of 1227 Felis catus cDNA sequences enriched for developmental, clinical and nutritional phenotypes. Irizarry KJ, et al. BMC Genomics, 2012 Jan 18. PMID 22257742, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in poly(A)+ mRNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear RNA export factor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference F.catus_Fca126_mat1.0 Primary Assembly

    Genomic

    1. NC_058377.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

      Range
      106310555..106321063 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045039463.1 → XP_044895398.1  nuclear RNA export factor 1 isoform X2

      Conserved Domains (4) summary
      smart00804
      Location:537 → 599
      TAP_C; C-terminal domain of vertebrate Tap protein
      COG4886
      Location:200 → 326
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00780
      Location:372 → 519
      NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...
      sd00035
      Location:223 → 265
      LRR_NTF; leucine-rich repeat [structural motif]

    2. XM_003993528.6 → XP_003993577.1  nuclear RNA export factor 1 isoform X1

      UniProtKB/TrEMBL
      M3WLB4
      Related
      ENSFCTP00005055636.1, ENSFCTT00005079801.1
      Conserved Domains (6) summary
      smart00804
      Location:555 → 617
      TAP_C; C-terminal domain of vertebrate Tap protein
      cd00780
      Location:381 → 537
      NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...
      sd00035
      Location:223 → 265
      LRR_NTF; leucine-rich repeat [structural motif]
      pfam09162
      Location:115 → 197
      Tap-RNA_bind; Tap, RNA-binding
      pfam12799
      Location:290 → 328
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:264 → 326
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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