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    KHDC4 KH domain containing 4, pre-mRNA splicing factor [ Felis catus (domestic cat) ]

    Gene ID: 101085343, updated on 8-Mar-2024

    Summary

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    Official Symbol
    KHDC4
    Official Full Name
    KH domain containing 4, pre-mRNA splicing factor
    Primary source
    VGNC:VGNC:63077
    See related
    EnsemblRapid:ENSFCTG00005011082
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Felis catus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
    Also known as
    KIAA0907
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: F1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) F1 NC_058384.1 (67469564..67486176)
    104 previous assembly Felis_catus_9.0 (GCF_000181335.3) F1 NC_018739.3 (69894885..69911951)

    Chromosome F1 - NC_058384.1Genomic Context describing neighboring genes Neighboring gene Rho/Rac guanine nucleotide exchange factor 2 Neighboring gene relaxin family peptide/INSL5 receptor 4 Neighboring gene small Cajal body-specific RNA 4 Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene Ras like without CAAX 1 Neighboring gene uncharacterized LOC123382763 Neighboring gene synaptotagmin 11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    KH homology domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference F.catus_Fca126_mat1.0 Primary Assembly

    Genomic

    1. NC_058384.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

      Range
      67469564..67486176
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003999631.5 → XP_003999680.1  KH homology domain-containing protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A337S9E5
      Related
      ENSFCTP00005020446.1, ENSFCTT00005031117.1
      Conserved Domains (2) summary
      cd22385
      Location:99 → 182
      KH-I_KHDC4_rpt1; first type I K homology (KH) RNA-binding domain found in KH homology domain-containing protein 4 (KHDC4) and similar proteins
      cd22386
      Location:229 → 330
      KH-I_KHDC4_rpt2; first type I K homology (KH) RNA-binding domain found in KH homology domain-containing protein 4 (KHDC4) and similar proteins

    2. XM_019822422.3 → XP_019677981.1  KH homology domain-containing protein 4 isoform X2

      Conserved Domains (1) summary
      cl00098
      Location:183 → 273
      KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
    Nucleotide Protein
    Heading Accession and Version

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