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    SPTBN5 spectrin beta, non-erythrocytic 5 [ Felis catus (domestic cat) ]

    Gene ID: 101083088, updated on 8-Mar-2024

    Summary

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    Official Symbol
    SPTBN5
    Official Full Name
    spectrin beta, non-erythrocytic 5
    Primary source
    VGNC:VGNC:65662
    See related
    EnsemblRapid:ENSFCTG00005012290
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Felis catus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: B3
    Exon count:
    69
    Annotation release Status Assembly Chr Location
    105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) B3 NC_058373.1 (61210199..61257725)
    104 previous assembly Felis_catus_9.0 (GCF_000181335.3) B3 NC_018728.3 (63441751..63488316)

    Chromosome B3 - NC_058373.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123385973 Neighboring gene phospholipase A2 group IVE Neighboring gene EH domain containing 4 Neighboring gene bifunctional peptidase and (3S)-lysyl hydroxylase JMJD7 Neighboring gene mitogen-activated protein kinase binding protein 1 Neighboring gene MAX dimerization protein MGA Neighboring gene 40S ribosomal protein S15a-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cortical actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spectrin beta chain, non-erythrocytic 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference F.catus_Fca126_mat1.0 Primary Assembly

    Genomic

    1. NC_058373.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

      Range
      61210199..61257725
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045059497.1 → XP_044915432.1  spectrin beta chain, non-erythrocytic 5 isoform X1

      UniProtKB/TrEMBL
      M3X304
      Related
      ENSFCTP00005024129.1, ENSFCTT00005035216.1
      Conserved Domains (3) summary
      smart00150
      Location:1071 → 1171
      SPEC; Spectrin repeats
      COG5069
      Location:19 → 365
      SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
      cd00176
      Location:1175 → 1382
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    2. XM_045059498.1 → XP_044915433.1  spectrin beta chain, non-erythrocytic 5 isoform X2

      UniProtKB/TrEMBL
      M3X304
      Conserved Domains (3) summary
      smart00150
      Location:997 → 1097
      SPEC; Spectrin repeats
      COG5069
      Location:20 → 291
      SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
      cd00176
      Location:1101 → 1308
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    3. XM_045059499.1 → XP_044915434.1  spectrin beta chain, non-erythrocytic 5 isoform X3

      UniProtKB/TrEMBL
      M3X304
      Conserved Domains (2) summary
      smart00150
      Location:766 → 866
      SPEC; Spectrin repeats
      cd00176
      Location:870 → 1077
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    Nucleotide Protein
    Heading Accession and Version

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