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    GGPS1 geranylgeranyl diphosphate synthase 1 [ Felis catus (domestic cat) ]

    Gene ID: 101082438, updated on 8-Mar-2024

    Summary

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    Official Symbol
    GGPS1
    Official Full Name
    geranylgeranyl diphosphate synthase 1
    Primary source
    VGNC:VGNC:62539
    See related
    EnsemblRapid:ENSFCTG00005020063
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Felis catus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: D2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) D2 NC_058378.1 (13421800..13432346, complement)
    104 previous assembly Felis_catus_9.0 (GCF_000181335.3) D2 NC_018733.3 (13646364..13656945, complement)

    Chromosome D2 - NC_058378.1Genomic Context describing neighboring genes Neighboring gene tubulin folding cofactor E Neighboring gene uncharacterized LOC109492854 Neighboring gene small nucleolar RNA SNORA64/SNORA10 family Neighboring gene AT-rich interaction domain 4B Neighboring gene U6 spliceosomal RNA Neighboring gene RNA binding motif protein 34

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables prenyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in isoprenoid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    geranylgeranyl pyrophosphate synthase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference F.catus_Fca126_mat1.0 Primary Assembly

    Genomic

    1. NC_058378.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

      Range
      13421800..13432346 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019814302.3 → XP_019669861.1  geranylgeranyl pyrophosphate synthase isoform X1

      UniProtKB/TrEMBL
      M3W9L8
      Conserved Domains (1) summary
      pfam00348
      Location:9 → 251
      polyprenyl_synt; Polyprenyl synthetase

    2. XM_045039921.1 → XP_044895856.1  geranylgeranyl pyrophosphate synthase isoform X2

      Conserved Domains (1) summary
      pfam00348
      Location:1 → 196
      polyprenyl_synt; Polyprenyl synthetase

    3. XM_003993903.6 → XP_003993952.1  geranylgeranyl pyrophosphate synthase isoform X1

      See identical proteins and their annotated locations for XP_003993952.1

      UniProtKB/TrEMBL
      M3W9L8
      Conserved Domains (1) summary
      pfam00348
      Location:9 → 251
      polyprenyl_synt; Polyprenyl synthetase

    4. XM_045039920.1 → XP_044895855.1  geranylgeranyl pyrophosphate synthase isoform X2

      Conserved Domains (1) summary
      pfam00348
      Location:1 → 196
      polyprenyl_synt; Polyprenyl synthetase

    5. XM_045039919.1 → XP_044895854.1  geranylgeranyl pyrophosphate synthase isoform X1

      UniProtKB/TrEMBL
      M3W9L8
      Related
      ENSFCTP00005042331.1, ENSFCTT00005057634.1
      Conserved Domains (1) summary
      pfam00348
      Location:9 → 251
      polyprenyl_synt; Polyprenyl synthetase

    6. XM_045039922.1 → XP_044895857.1  geranylgeranyl pyrophosphate synthase isoform X2

      Conserved Domains (1) summary
      pfam00348
      Location:1 → 196
      polyprenyl_synt; Polyprenyl synthetase
    Nucleotide Protein
    Heading Accession and Version

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