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    Lrrtm1 leucine rich repeat transmembrane neuronal 1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100731553, updated on 3-Apr-2024

    Summary

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    Gene symbol
    Lrrtm1
    Gene description
    leucine rich repeat transmembrane neuronal 1
    See related
    Ensembl:ENSCPOG00000001371
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947501.1 (33371324..33386449, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176382.1 (9564410..9578972)

    NW_026947501.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134471494 Neighboring gene uncharacterized LOC134471495 Neighboring gene catenin alpha 2 Neighboring gene uncharacterized LOC134471496 Neighboring gene U1 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat transmembrane neuronal protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947501.1 Reference mCavPor4.1

      Range
      33371324..33386449 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063229645.1 → XP_063085715.1  leucine-rich repeat transmembrane neuronal protein 1

      UniProtKB/TrEMBL
      H0W3A5

    RNA

    1. XR_010040686.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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