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    Spats2 spermatogenesis associated serine rich 2 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100725676, updated on 3-Apr-2024

    Summary

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    Gene symbol
    Spats2
    Gene description
    spermatogenesis associated serine rich 2
    See related
    Ensembl:ENSCPOG00000009858
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947491.1 (40927680..41039587)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176410.1 (50121184..50232681, complement)

    NW_026947491.1Genomic Context describing neighboring genes Neighboring gene complement C1q like 4 Neighboring gene DnaJ heat shock protein family (Hsp40) member C22 Neighboring gene 5S ribosomal RNA Neighboring gene large ribosomal subunit protein eL37-like Neighboring gene potassium voltage-gated channel subfamily H member 3 Neighboring gene microspherule protein 1 Neighboring gene family with sequence similarity 186 member B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spermatogenesis-associated serine-rich protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947491.1 Reference mCavPor4.1

      Range
      40927680..41039587
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063254703.1 → XP_063110773.1  spermatogenesis-associated serine-rich protein 2 isoform X1

      UniProtKB/TrEMBL
      H0VFJ7

    2. XM_063254704.1 → XP_063110774.1  spermatogenesis-associated serine-rich protein 2 isoform X2

    3. XM_063254701.1 → XP_063110771.1  spermatogenesis-associated serine-rich protein 2 isoform X1

      UniProtKB/TrEMBL
      H0VFJ7

    4. XM_063254702.1 → XP_063110772.1  spermatogenesis-associated serine-rich protein 2 isoform X1

      UniProtKB/TrEMBL
      H0VFJ7

    5. XM_023567621.2 → XP_023423389.1  spermatogenesis-associated serine-rich protein 2 isoform X1

      UniProtKB/TrEMBL
      H0VFJ7
      Related
      ENSCPOP00000031525.1
      Conserved Domains (1) summary
      pfam07139
      Location:81 → 379
      DUF1387; Protein of unknown function (DUF1387)

    6. XM_013159409.3 → XP_013014863.1  spermatogenesis-associated serine-rich protein 2 isoform X1

      UniProtKB/TrEMBL
      H0VFJ7
      Related
      ENSCPOP00000008845.3
      Conserved Domains (1) summary
      pfam07139
      Location:81 → 379
      DUF1387; Protein of unknown function (DUF1387)
    Nucleotide Protein
    Heading Accession and Version

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