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    Trub2 TruB pseudouridine synthase family member 2 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100716546, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Trub2
    Gene description
    TruB pseudouridine synthase family member 2
    See related
    Ensembl:ENSCPOG00000013535
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947532.1 (5886788..5894538)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176392.1 (3858062..3865041)

    NW_026947532.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 27 member 4 Neighboring gene coenzyme Q4 Neighboring gene polycomb group RING finger protein 1-like Neighboring gene SWI5 homologous recombination repair protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pseudouridine synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pseudouridine synthesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pseudouridylate synthase TRUB2, mitochondrial
    Names
    TruB pseudouridine (psi) synthase homolog 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947532.1 Reference mCavPor4.1

      Range
      5886788..5894538
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003470604.5 → XP_003470652.2  pseudouridylate synthase TRUB2, mitochondrial isoform X1

      UniProtKB/TrEMBL
      H0VNY6
      Related
      ENSCPOP00000012187.3
      Conserved Domains (1) summary
      cd02868
      Location:11 → 283
      PseudoU_synth_hTruB2_like; Pseudouridine synthase, humanTRUB2_like

    2. XM_063244313.1 → XP_063100383.1  pseudouridylate synthase TRUB2, mitochondrial isoform X2

    Nucleotide Protein
    Heading Accession and Version

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