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    ZNF398 zinc finger protein 398 [ Canis lupus familiaris (dog) ]

    Gene ID: 100687206, updated on 8-Mar-2024

    Summary

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    Official Symbol
    ZNF398provided by VGNC
    Official Full Name
    zinc finger protein 398provided by VGNC
    Primary source
    VGNC:VGNC:48718
    See related
    Ensembl:ENSCAFG00845008073
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human all
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    Genomic context

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    Location:
    chromosome: 16
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 16 NC_051820.1 (15907774..15945351)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 16 NC_006598.4 (14802473..14840062)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 16 NC_049237.1 (14919290..14956856)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 16 NC_049276.1 (14288401..14325962)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 16 NC_049757.1 (14874859..14906931)

    Chromosome 16 - NC_051820.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 786 Neighboring gene zinc finger protein 425 Neighboring gene zinc finger protein 282 Neighboring gene uncharacterized LOC119869559 Neighboring gene zinc finger protein 212

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 398

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051820.1 Reference ROS_Cfam_1.0

      Range
      15907774..15945351
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038689369.1 → XP_038545297.1  zinc finger protein 398

      UniProtKB/TrEMBL
      A0A8C0T2X4, A0A8I3MYE1
      Related
      ENSCAFP00845011058.1, ENSCAFT00845014260.1
      Conserved Domains (4) summary
      cd07765
      Location:143 → 182
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:344 → 588
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:485 → 505
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12417
      Location:57 → 113
      DUF3669; Zinc finger protein

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049276.1 Alternate UMICH_Zoey_3.1

      Range
      14288401..14325962
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038497195.1 → XP_038353123.1  zinc finger protein 398

      Conserved Domains (4) summary
      cd07765
      Location:143 → 182
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:344 → 588
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:485 → 505
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12417
      Location:57 → 113
      DUF3669; Zinc finger protein

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049757.1 Alternate UNSW_CanFamBas_1.0

      Range
      14874859..14906931
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038623618.1 → XP_038479546.1  zinc finger protein 398

      Conserved Domains (4) summary
      cd07765
      Location:143 → 182
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:344 → 588
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:485 → 505
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12417
      Location:57 → 113
      DUF3669; Zinc finger protein

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049237.1 Alternate UU_Cfam_GSD_1.0

      Range
      14919290..14956856
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038559616.1 → XP_038415544.1  zinc finger protein 398

      UniProtKB/TrEMBL
      A0A8C0T2X4, A0A8I3MYE1
      Conserved Domains (4) summary
      cd07765
      Location:143 → 182
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:344 → 588
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:485 → 505
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12417
      Location:57 → 113
      DUF3669; Zinc finger protein

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006598.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      14802473..14840062
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003432077.5 → XP_003432125.1  zinc finger protein 398

      UniProtKB/TrEMBL
      A0A8C0T2X4, A0A8I3MYE1
      Conserved Domains (4) summary
      cd07765
      Location:143 → 182
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:344 → 588
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:485 → 505
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12417
      Location:57 → 113
      DUF3669; Zinc finger protein
    Nucleotide Protein
    Heading Accession and Version

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