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    TTF2 transcription termination factor 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 100684320, updated on 8-Mar-2024

    Summary

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    Official Symbol
    TTF2provided by VGNC
    Official Full Name
    transcription termination factor 2provided by VGNC
    Primary source
    VGNC:VGNC:47968
    See related
    Ensembl:ENSCAFG00845029143
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 17
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (55326470..55366038)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (54091998..54131738)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (54975030..55014609)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (54362955..54402878)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (54399699..54439626)

    Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene CD101 molecule Neighboring gene uncharacterized LOC119869821 Neighboring gene tripartite motif containing 45 Neighboring gene 60S ribosomal protein L17-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription termination factor 2; LOW QUALITY PROTEIN: transcription termination factor 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051821.1 Reference ROS_Cfam_1.0

      Range
      55326470..55366038
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038691883.1 → XP_038547811.1  transcription termination factor 2

      UniProtKB/TrEMBL
      A0A8C0L5C8, A0A8C0YX11, A0A8I3Q0R0, A0A8P0SES4
      Related
      ENSCAFP00845040474.1, ENSCAFT00845051582.1
      Conserved Domains (3) summary
      COG0553
      Location:522 → 1148
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18072
      Location:554 → 806
      DEXHc_TTF2; DEAH-box helicase domain of TTF2
      pfam06839
      Location:4 → 39
      zf-GRF; GRF zinc finger

    RNA

    1. XR_005440385.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049277.1 Alternate UMICH_Zoey_3.1

      Range
      54362955..54402878
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038499312.1 → XP_038355240.1  LOW QUALITY PROTEIN: transcription termination factor 2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

      Range
      54399699..54439626
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038625952.1 → XP_038481880.1  transcription termination factor 2

    RNA

    1. XR_005406735.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

      Range
      54975030..55014609
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038561881.1 → XP_038417809.1  transcription termination factor 2

      UniProtKB/TrEMBL
      A0A8C0L5C8, A0A8C0YX11, A0A8I3Q0R0, A0A8P0SES4
      Conserved Domains (3) summary
      COG0553
      Location:522 → 1148
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18072
      Location:554 → 806
      DEXHc_TTF2; DEAH-box helicase domain of TTF2
      pfam06839
      Location:4 → 39
      zf-GRF; GRF zinc finger

    RNA

    1. XR_005372639.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      54091998..54131738
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005630660.4 → XP_005630717.1  transcription termination factor 2

      UniProtKB/TrEMBL
      A0A8C0L5C8, A0A8C0YX11, A0A8I3Q0R0, A0A8P0SES4
      Conserved Domains (3) summary
      COG0553
      Location:522 → 1148
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18072
      Location:554 → 806
      DEXHc_TTF2; DEAH-box helicase domain of TTF2
      pfam06839
      Location:4 → 39
      zf-GRF; GRF zinc finger

    RNA

    1. XR_002615454.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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