U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    KNCN kinocilin [ Canis lupus familiaris (dog) ]

    Gene ID: 100684174, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    KNCNprovided by VGNC
    Official Full Name
    kinocilinprovided by VGNC
    Primary source
    VGNC:VGNC:108228
    See related
    Ensembl:ENSCAFG00845019249
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See KNCN in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (14051647..14059919)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (14021605..14029877)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (13990841..13999113)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (13852927..13861199)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (13921520..13929792)

    Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene MOB kinase activator 3C Neighboring gene MAPK interacting serine/threonine kinase 1 Neighboring gene uncharacterized LOC106559794 Neighboring gene transmembrane protein 275

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in apical plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cuticular plate IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in kinocilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    kinocilin

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051819.1 Reference ROS_Cfam_1.0

      Range
      14051647..14059919
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038687782.1 → XP_038543710.1  kinocilin isoform X4

      UniProtKB/TrEMBL
      A0A8C0KR83, A0A8C0SRM0, A0A8I3S0Z3
      Related
      ENSCAFP00845026589.1, ENSCAFT00845033978.1
      Conserved Domains (1) summary
      pfam15033
      Location:1 → 123
      Kinocilin; Kinocilin protein

    2. XM_038687779.1 → XP_038543707.1  kinocilin isoform X2

      UniProtKB/TrEMBL
      A0A8C0KR83
      Conserved Domains (1) summary
      pfam15033
      Location:1 → 108
      Kinocilin; Kinocilin protein

    3. XM_038687777.1 → XP_038543705.1  kinocilin isoform X1

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    4. XM_038687781.1 → XP_038543709.1  kinocilin isoform X3

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    5. XM_038687778.1 → XP_038543706.1  kinocilin isoform X1

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    6. XM_038687780.1 → XP_038543708.1  kinocilin isoform X2

      UniProtKB/TrEMBL
      A0A8C0KR83
      Conserved Domains (1) summary
      pfam15033
      Location:1 → 108
      Kinocilin; Kinocilin protein

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049275.1 Alternate UMICH_Zoey_3.1

      Range
      13852927..13861199
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038495786.1 → XP_038351714.1  kinocilin isoform X4

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 123
      Kinocilin; Kinocilin protein

    2. XM_038495783.1 → XP_038351711.1  kinocilin isoform X2

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 108
      Kinocilin; Kinocilin protein

    3. XM_038495781.1 → XP_038351709.1  kinocilin isoform X1

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    4. XM_038495785.1 → XP_038351713.1  kinocilin isoform X3

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    5. XM_038495782.1 → XP_038351710.1  kinocilin isoform X1

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    6. XM_038495784.1 → XP_038351712.1  kinocilin isoform X2

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 108
      Kinocilin; Kinocilin protein

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

      Range
      13921520..13929792
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038622032.1 → XP_038477960.1  kinocilin isoform X4

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 123
      Kinocilin; Kinocilin protein

    2. XM_038622029.1 → XP_038477957.1  kinocilin isoform X2

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 108
      Kinocilin; Kinocilin protein

    3. XM_038622027.1 → XP_038477955.1  kinocilin isoform X1

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    4. XM_038622031.1 → XP_038477959.1  kinocilin isoform X3

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    5. XM_038622028.1 → XP_038477956.1  kinocilin isoform X1

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    6. XM_038622030.1 → XP_038477958.1  kinocilin isoform X2

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 108
      Kinocilin; Kinocilin protein

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

      Range
      13990841..13999113
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038558160.1 → XP_038414088.1  kinocilin isoform X4

      UniProtKB/TrEMBL
      A0A8C0KR83, A0A8C0SRM0, A0A8I3S0Z3
      Conserved Domains (1) summary
      pfam15033
      Location:1 → 123
      Kinocilin; Kinocilin protein

    2. XM_038558157.1 → XP_038414085.1  kinocilin isoform X2

      UniProtKB/TrEMBL
      A0A8C0KR83
      Conserved Domains (1) summary
      pfam15033
      Location:1 → 108
      Kinocilin; Kinocilin protein

    3. XM_038558155.1 → XP_038414083.1  kinocilin isoform X1

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    4. XM_038558159.1 → XP_038414087.1  kinocilin isoform X3

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    5. XM_038558156.1 → XP_038414084.1  kinocilin isoform X1

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    6. XM_038558158.1 → XP_038414086.1  kinocilin isoform X2

      UniProtKB/TrEMBL
      A0A8C0KR83
      Conserved Domains (1) summary
      pfam15033
      Location:1 → 108
      Kinocilin; Kinocilin protein

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      14021605..14029877
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038451527.1 → XP_038307455.1  kinocilin isoform X4

      UniProtKB/TrEMBL
      A0A8C0KR83, A0A8C0SRM0, A0A8I3S0Z3
      Conserved Domains (1) summary
      pfam15033
      Location:1 → 123
      Kinocilin; Kinocilin protein

    2. XM_038451514.1 → XP_038307442.1  kinocilin isoform X2

      UniProtKB/TrEMBL
      A0A8C0KR83
      Conserved Domains (1) summary
      pfam15033
      Location:1 → 108
      Kinocilin; Kinocilin protein

    3. XM_022427973.2 → XP_022283681.1  kinocilin isoform X1

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    4. XM_022427977.2 → XP_022283685.1  kinocilin isoform X3

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    5. XM_022427974.2 → XP_022283682.1  kinocilin isoform X1

      Conserved Domains (1) summary
      pfam15033
      Location:1 → 106
      Kinocilin; Kinocilin protein

    6. XM_022427976.2 → XP_022283684.1  kinocilin isoform X2

      UniProtKB/TrEMBL
      A0A8C0KR83
      Conserved Domains (1) summary
      pfam15033
      Location:1 → 108
      Kinocilin; Kinocilin protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Miscellaneous