U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    SMG1P4 SMG1 pseudogene 4 [ Homo sapiens (human) ]

    Gene ID: 100507526, updated on 8-Nov-2023

    Summary

    Official Symbol
    SMG1P4provided by HGNC
    Official Full Name
    SMG1 pseudogene 4provided by HGNC
    Primary source
    HGNC:HGNC:49861
    See related
    Ensembl:ENSG00000185710 AllianceGenome:HGNC:49861
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    16p12.2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (21879337..21916026, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (22301176..22337863)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (21890658..21927347, complement)

    Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene RRN3 pseudogene 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:21830990-21831795 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:21831796-21832600 Neighboring gene uncharacterized LOC112268174 Neighboring gene nuclear pore complex interacting protein family member B4 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:21875652-21876336 Neighboring gene small nucleolar RNA U13 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:21945923-21946424 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:21946425-21946924 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10562 Neighboring gene ABCA3 pseudogene 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:21964563-21965280 Neighboring gene ubiquinol-cytochrome c reductase core protein 2 Neighboring gene PDZ domain containing 9 Neighboring gene cell division cycle associated 8 pseudogene

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Other Names

    • SMG1 phosphatidylinositol 3-kinase-related kinase pseudogene
    • SMG1P4, nonsense mediated mRNA decay associated PI3K related kinase pseudogene 4
    • smg-1 homolog, phosphatidylinositol 3-kinase-related kinase pseudogene

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_027945.2 

      Range
      101..36790
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

      Range
      21879337..21916026 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_017852933.1 Reference GRCh38.p14 PATCHES

      Range
      1189012..1225701
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060940.1 Alternate T2T-CHM13v2.0

      Range
      22301176..22337863
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)