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    PTCH1 patched 1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100345046, updated on 8-Mar-2024

    Summary

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    Gene symbol
    PTCH1
    Gene description
    patched 1
    See related
    Ensembl:ENSOCUG00000002973
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 1 NC_067374.1 (88462998..88529346, complement)

    Chromosome 1 - NC_067374.1Genomic Context describing neighboring genes Neighboring gene FA complementation group C Neighboring gene 40S ribosomal protein S25-like Neighboring gene uncharacterized LOC127491354 Neighboring gene 60S ribosomal protein L7-like Neighboring gene uncharacterized LOC127491359

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067374.1 Chromosome 1 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hedgehog family protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hedgehog receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables smoothened binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in smoothened signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein patched homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067374.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      88462998..88529346 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051847163.1 → XP_051703123.1  protein patched homolog 1 isoform X2

    2. XM_051847159.1 → XP_051703119.1  protein patched homolog 1 isoform X1

    3. XM_051847169.1 → XP_051703129.1  protein patched homolog 1 isoform X3

    Nucleotide Protein
    Heading Accession and Version

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