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    ATG4A autophagy related 4A cysteine peptidase [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100338183, updated on 8-Mar-2024

    Summary

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    Gene symbol
    ATG4A
    Gene description
    autophagy related 4A cysteine peptidase
    See related
    Ensembl:ENSOCUG00000010839
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: X
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) X NC_067395.1 (56698070..56765343)

    Chromosome X - NC_067395.1Genomic Context describing neighboring genes Neighboring gene NLR family pyrin domain containing 12 Neighboring gene testis expressed 13B Neighboring gene V-set and immunoglobulin domain containing 1 Neighboring gene proteasome 26S subunit, non-ATPase 10 Neighboring gene collagen type IV alpha 6 chain Neighboring gene collagen type IV alpha 5 chain Neighboring gene 60S ribosomal protein L6-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067395.1 Chromosome X Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-phosphatidylethanolamide deconjugating activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cysteine protease ATG4A
    Names
    ATG4 autophagy related 4 homolog A
    autophagy-related cysteine endopeptidase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067395.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      56698070..56765343
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008272859.3 → XP_008271081.1  cysteine protease ATG4A isoform X1

      UniProtKB/TrEMBL
      A0A5F9C8B4, A0A5F9CKN1
      Related
      ENSOCUP00000034020.1
      Conserved Domains (1) summary
      pfam03416
      Location:47 → 339
      Peptidase_C54; Peptidase family C54

    2. XM_008272860.3 → XP_008271082.1  cysteine protease ATG4A isoform X2

      UniProtKB/TrEMBL
      A0A5F9C8B4, G1T032
      Related
      ENSOCUP00000009326.3
      Conserved Domains (1) summary
      pfam03416
      Location:43 → 335
      Peptidase_C54; Peptidase family C54
    Nucleotide Protein
    Heading Accession and Version

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