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    HNRNPA1P42 heterogeneous nuclear ribonucleoprotein A1 pseudogene 42 [ Homo sapiens (human) ]

    Gene ID: 100287266, updated on 10-Oct-2023

    Summary

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    Official Symbol
    HNRNPA1P42provided by HGNC
    Official Full Name
    heterogeneous nuclear ribonucleoprotein A1 pseudogene 42provided by HGNC
    Primary source
    HGNC:HGNC:48771
    See related
    Ensembl:ENSG00000233615 AllianceGenome:HGNC:48771
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    1q43
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (240919629..240920809)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (240331129..240332309)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (241082929..241084109)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene THAP domain containing 12 pseudogene 8 Neighboring gene uncharacterized LOC124904602 Neighboring gene regulator of G protein signaling 7 Neighboring gene riboflavin kinase pseudogene 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:241051410-241051937 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_6389 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr1:241099640-241100839 Neighboring gene NANOG hESC enhancer GRCh37_chr1:241133415-241133985 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_6394 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:241175575-241176086 Neighboring gene ribosomal protein lateral stalk subunit P1 pseudogene 2 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:241208316-241208874 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:241208875-241209433 Neighboring gene NANOG hESC enhancer GRCh37_chr1:241229736-241230326 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:241252482-241252653 Neighboring gene microRNA 3123

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_022832.2 

      Range
      101..1281
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      240919629..240920809
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      240331129..240332309
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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