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    TRY-GTA3-1 tRNA-Tyr (anticodon GTA) 3-1 [ Homo sapiens (human) ]

    Gene ID: 100189162, updated on 10-Oct-2023

    Summary

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    Official Symbol
    TRY-GTA3-1provided by HGNC
    Official Full Name
    tRNA-Tyr (anticodon GTA) 3-1provided by HGNC
    Primary source
    HGNC:HGNC:34724
    See related
    AllianceGenome:HGNC:34724
    Gene type
    tRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TRNAY7
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    Location:
    6p22.2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (26577104..26577192)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (26445498..26445586)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (26577332..26577420)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374988 Neighboring gene tRNA-Ala (anticodon AGC) 11-1 Neighboring gene tRNA-Tyr (anticodon GTA) 8-1 Neighboring gene CRISPRi-validated cis-regulatory element chr6.1185 Neighboring gene Sharpr-MPRA regulatory region 4089 Neighboring gene tRNA-Tyr (anticodon GTA) 6-1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24249 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24250 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24251 Neighboring gene activator of basal transcription 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • tRNA-Tyr-GTA-3-1
    • transfer RNA tyrosine 7 (anticodon GUA)
    • transfer RNA-Tyr (GTA) 3-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      26577104..26577192
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791780.1 Reference GRCh38.p14 PATCHES

      Range
      123281..123369
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      26445498..26445586
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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