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    TRE-TTC2-1 tRNA-Glu (anticodon TTC) 2-1 [ Homo sapiens (human) ]

    Gene ID: 100189030, updated on 10-Oct-2023

    Summary

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    Official Symbol
    TRE-TTC2-1provided by HGNC
    Official Full Name
    tRNA-Glu (anticodon TTC) 2-1provided by HGNC
    Primary source
    HGNC:HGNC:34589
    See related
    AllianceGenome:HGNC:34589
    Gene type
    tRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TRNAE7
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    Genomic context

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    Location:
    13q14.12
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (44917927..44917998, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (44137989..44138060, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (45492062..45492133, complement)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:45373665-45374164 Neighboring gene long intergenic non-protein coding RNA 330 Neighboring gene uncharacterized LOC105370187 Neighboring gene uncharacterized LOC107984619 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7675 Neighboring gene nuclear FMR1 interacting protein 1 Neighboring gene Sharpr-MPRA regulatory region 6953 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:45563144-45563782 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:45563783-45564419 Neighboring gene GPALPP motifs containing 1 Neighboring gene RNA, 7SL, cytoplasmic 49, pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • tRNA-Glu (TTC) 2-1
    • transfer RNA glutamic acid 7 (anticodon UUC)
    • transfer RNA-Glu (TTC) 2-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      44917927..44917998 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      44137989..44138060 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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