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    TRL-AAG1-3 tRNA-Leu (anticodon AAG) 1-3 [ Homo sapiens (human) ]

    Gene ID: 100189004, updated on 10-Oct-2023

    Summary

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    Official Symbol
    TRL-AAG1-3provided by HGNC
    Official Full Name
    tRNA-Leu (anticodon AAG) 1-3provided by HGNC
    Primary source
    HGNC:HGNC:34561
    See related
    AllianceGenome:HGNC:34561
    Gene type
    tRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TRNAL4
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    Genomic context

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    Location:
    5q35.3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (181174044..181174125, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (181734068..181734149, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (180601044..180601125, complement)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:180596501-180597231 Neighboring gene tRNA-Val (anticodon AAC) 1-3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:180597232-180597961 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23780 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16780 Neighboring gene tRNA-Val (anticodon CAC) 1-4 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16781 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:180611412-180611912 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16782 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16783 Neighboring gene tRNA-Leu (anticodon AAG) 2-1 Neighboring gene tRNA-Val (anticodon AAC) 2-1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • tRNA-Leu (AAG) 1-3
    • transfer RNA leucine 4 (anticodon AAG)
    • transfer RNA-Leu (AAG) 1-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      181174044..181174125 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      181734068..181734149 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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