U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    CFAP44 cilia and flagella associated protein 44 [ Equus caballus (horse) ]

    Gene ID: 100071418, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CFAP44provided by VGNC
    Official Full Name
    cilia and flagella associated protein 44provided by VGNC
    Primary source
    VGNC:VGNC:57079
    See related
    Ensembl:ENSECAG00000020163
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Also known as
    WDR52
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 19
    Exon count:
    38
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 19 NC_009162.3 (47201390..47306585)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 19 NC_009162.2 (44450503..44551443)

    Chromosome 19 - NC_009162.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111769094 Neighboring gene spindle and centriole associated protein 1 Neighboring gene BOC cell adhesion associated, oncogene regulated Neighboring gene uncharacterized LOC111769095 Neighboring gene nucleolus and neural progenitor protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    cilia- and flagella-associated protein 44
    Names
    WD repeat domain 52

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009162.3 Reference EquCab3.0 Primary Assembly

      Range
      47201390..47306585
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023623762.1 → XP_023479530.1  cilia- and flagella-associated protein 44 isoform X2

      UniProtKB/TrEMBL
      A0A9L0RZT3, F7DGW3
      Related
      ENSECAP00000067393.1, ENSECAT00000117069.1
      Conserved Domains (4) summary
      sd00039
      Location:374 → 422
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:237 → 602
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl25732
      Location:1549 → 1834
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26511
      Location:893 → 1231
      Neuromodulin_N; Gap junction protein N-terminal region

    2. XM_023623763.1 → XP_023479531.1  cilia- and flagella-associated protein 44 isoform X2

      UniProtKB/TrEMBL
      A0A9L0RZT3, F7DGW3
      Conserved Domains (4) summary
      sd00039
      Location:374 → 422
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:237 → 602
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl25732
      Location:1549 → 1834
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26511
      Location:893 → 1231
      Neuromodulin_N; Gap junction protein N-terminal region

    3. XM_023623766.1 → XP_023479534.1  cilia- and flagella-associated protein 44 isoform X5

      Conserved Domains (2) summary
      sd00039
      Location:392 → 440
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:255 → 620
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    4. XM_023623765.1 → XP_023479533.1  cilia- and flagella-associated protein 44 isoform X4

      UniProtKB/TrEMBL
      F7DGW3
      Conserved Domains (4) summary
      sd00039
      Location:392 → 440
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:255 → 620
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl25732
      Location:1386 → 1638
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26511
      Location:911 → 1249
      Neuromodulin_N; Gap junction protein N-terminal region

    5. XM_023623768.1 → XP_023479536.1  cilia- and flagella-associated protein 44 isoform X6

      Conserved Domains (2) summary
      sd00039
      Location:392 → 440
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:255 → 620
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    6. XM_023623769.1 → XP_023479537.1  cilia- and flagella-associated protein 44 isoform X7

      Conserved Domains (2) summary
      sd00039
      Location:392 → 440
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:255 → 620
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    7. XM_014732886.2 → XP_014588372.2  cilia- and flagella-associated protein 44 isoform X1

      UniProtKB/TrEMBL
      A0A9L0SKI5, F7DGW3
      Related
      ENSECAP00000075369.1, ENSECAT00000119005.1
      Conserved Domains (4) summary
      sd00039
      Location:392 → 440
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:255 → 620
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl25732
      Location:1567 → 1852
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26511
      Location:911 → 1249
      Neuromodulin_N; Gap junction protein N-terminal region

    8. XM_023623764.1 → XP_023479532.1  cilia- and flagella-associated protein 44 isoform X3

      UniProtKB/TrEMBL
      F7DGW3
      Conserved Domains (4) summary
      sd00039
      Location:392 → 440
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:255 → 563
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl25732
      Location:1530 → 1815
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26511
      Location:874 → 1212
      Neuromodulin_N; Gap junction protein N-terminal region
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.