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    CDC16 cell division cycle 16 [ Equus caballus (horse) ]

    Gene ID: 100069285, updated on 8-Mar-2024

    Summary

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    Official Symbol
    CDC16provided by VGNC
    Official Full Name
    cell division cycle 16provided by VGNC
    Primary source
    VGNC:VGNC:49334
    See related
    Ensembl:ENSECAG00000020620
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 17
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 17 NC_009160.3 (80615754..80645146)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 17 NC_009160.2 (80652662..80680592)

    Chromosome 17 - NC_009160.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106781892 Neighboring gene translation initiation factor IF-2 Neighboring gene UPF3A regulator of nonsense mediated mRNA decay Neighboring gene chromosome alignment maintaining phosphoprotein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cell division cycle protein 16 homolog
    Names
    cell division cycle 16 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009160.3 Reference EquCab3.0 Primary Assembly

      Range
      80615754..80645146
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023621909.1 → XP_023477677.1  cell division cycle protein 16 homolog isoform X1

      UniProtKB/TrEMBL
      F6TY83
      Related
      ENSECAP00000018430.3, ENSECAT00000022312.3
      Conserved Domains (4) summary
      sd00006
      Location:402 → 430
      TPR; TPR repeat [structural motif]
      pfam12895
      Location:15 → 94
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
      pfam13424
      Location:447 → 511
      TPR_12; Tetratricopeptide repeat
      cl26002
      Location:371 → 511
      TPR_11; TPR repeat

    2. XM_023621910.1 → XP_023477678.1  cell division cycle protein 16 homolog isoform X2

      UniProtKB/TrEMBL
      A0A9L0R876, F6TY83
      Related
      ENSECAP00000060232.1, ENSECAT00000102806.1
      Conserved Domains (4) summary
      sd00006
      Location:389 → 417
      TPR; TPR repeat [structural motif]
      pfam12895
      Location:15 → 81
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
      pfam13424
      Location:434 → 498
      TPR_12; Tetratricopeptide repeat
      cl26002
      Location:358 → 498
      TPR_11; TPR repeat

    3. XM_023621911.1 → XP_023477679.1  cell division cycle protein 16 homolog isoform X3

      UniProtKB/TrEMBL
      A0A9L0S6Z8
      Related
      ENSECAP00000071901.1, ENSECAT00000108259.1
      Conserved Domains (5) summary
      COG3063
      Location:305 → 445
      PilF; Tfp pilus assembly protein PilF [Cell motility, Extracellular structures]
      TIGR02917
      Location:68 → 436
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:336 → 364
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:381 → 445
      TPR_12; Tetratricopeptide repeat
      pfam12895
      Location:5 → 28
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
    Nucleotide Protein
    Heading Accession and Version

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