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    EVPL envoplakin [ Equus caballus (horse) ]

    Gene ID: 100051395, updated on 8-Mar-2024

    Summary

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    Official Symbol
    EVPLprovided by VGNC
    Official Full Name
    envoplakinprovided by VGNC
    Primary source
    VGNC:VGNC:56422
    See related
    Ensembl:ENSECAG00000010028
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 11
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 11 NC_009154.3 (6064560..6081279)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 11 NC_009154.2 (6072431..6089231)

    Chromosome 11 - NC_009154.3Genomic Context describing neighboring genes Neighboring gene zinc activated ion channel Neighboring gene galanin receptor 2 Neighboring gene signal recognition particle 68 Neighboring gene cyclin dependent kinase 3 Neighboring gene TEN1 subunit of CST complex Neighboring gene acyl-CoA oxidase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cadherin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intermediate filament cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in wound healing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intermediate filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    envoplakin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009154.3 Reference EquCab3.0 Primary Assembly

      Range
      6064560..6081279
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023651988.1 → XP_023507756.1  envoplakin

      UniProtKB/TrEMBL
      F6PPS7
      Related
      ENSECAP00000008178.4, ENSECAT00000010580.4
      Conserved Domains (5) summary
      smart00250
      Location:1894 → 1931
      PLEC; Plectin repeat
      cd00176
      Location:228 → 402
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      pfam00681
      Location:1857 → 1897
      Plectin; Plectin repeat
      cl17036
      Location:425 → 462
      SH3; Src Homology 3 domain superfamily
      cl25732
      Location:912 → 1676
      SMC_N; RecF/RecN/SMC N terminal domain
    Nucleotide Protein
    Heading Accession and Version

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