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    PEX3-1 peroxin 3-1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821342, updated on 7-Sep-2023

    Summary

    Gene symbol
    PEX3-1
    Gene description
    peroxin 3-1
    Primary source
    Araport:AT3G18160
    Locus tag
    AT3G18160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MRC8.15; peroxin 3-1
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    Genomic context

    See PEX3-1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (6220567..6223073)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene RNI-like superfamily protein Neighboring gene modifier of snc1,4 Neighboring gene Glycosyltransferase family 61 protein Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001161150.1
    NM_112698.4
    NM_202603.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in peroxisome organization IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within peroxisome organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
     
    located_in peroxisomal membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in peroxisome IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    peroxin 3-1
    NP_001154622.1
    • peroxin 3-1 (PEX3-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peroxisome organization; LOCATED IN: peroxisome, integral to peroxisomal membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxin-3 (InterPro:IPR006966); BEST Arabidopsis thaliana protein match is: peroxin 3 (TAIR:AT1G48635.1); Has 308 Blast hits to 308 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 121; Plants - 49; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
    NP_566598.1
    • peroxin 3-1 (PEX3-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peroxisome organization; LOCATED IN: mitochondrion, peroxisome, integral to peroxisomal membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxin-3 (InterPro:IPR006966); BEST Arabidopsis thaliana protein match is: peroxin 3 (TAIR:AT1G48635.1); Has 315 Blast hits to 315 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 128; Plants - 49; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
    NP_974332.1
    • peroxin 3-1 (PEX3-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peroxisome organization; LOCATED IN: peroxisome, integral to peroxisomal membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxin-3 (InterPro:IPR006966); BEST Arabidopsis thaliana protein match is: peroxin 3 (TAIR:AT1G48635.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6220567..6223073
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112698.4NP_566598.1  peroxin 3-1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566598.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LDG7, Q9LV25
      UniProtKB/TrEMBL
      A0A178VFX7, A0A5S9XD87, A0A654F8A9
      Conserved Domains (1) summary
      pfam04882
      Location:10355
      Peroxin-3
    2. NM_202603.1NP_974332.1  peroxin 3-1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974332.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VFX7, F4J7K5
      Conserved Domains (1) summary
      pfam04882
      Location:58301
      Peroxin-3; Peroxin-3
    3. NM_001161150.1NP_001154622.1  peroxin 3-1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154622.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VFX7, F4J7K3
      Conserved Domains (1) summary
      pfam04882
      Location:28373
      Peroxin-3; Peroxin-3