U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    tcf25 transcription factor 25 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 780251, updated on 5-Mar-2024

    Summary

    Official Symbol
    tcf25provided by Xenbase
    Official Full Name
    transcription factor 25provided by Xenbase
    Primary source
    Xenbase:XB-GENE-478622
    See related
    Ensembl:ENSXETG00000023414
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    hulp1; nulp1; fksg26; pro2620
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 4
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (59777361..59801047, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (63541504..63565185)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene tubulin beta 3 class III Neighboring gene melanocortin 1 receptor Neighboring gene tyrosine aminotransferase Neighboring gene uncharacterized LOC116410561

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    ribosome quality control complex subunit TCF25
    Names
    nuclear localized protein 1 (1J245)
    transcription factor 25 (basic helix-loop-helix)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001079322.1NP_001072790.1  ribosome quality control complex subunit TCF25

      See identical proteins and their annotated locations for NP_001072790.1

      Status: PROVISIONAL

      Source sequence(s)
      BC121284
      UniProtKB/TrEMBL
      A0A6I8RHZ3, Q0VA28
      Related
      ENSXETP00000084528.2, ENSXETT00000100951.2
      Conserved Domains (1) summary
      pfam04910
      Location:248588
      Tcf25; Transcriptional repressor TCF25

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      59777361..59801047 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)