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    Krtap17-1 keratin associated protein 17-1 [ Mus musculus (house mouse) ]

    Gene ID: 77914, updated on 5-Mar-2024

    Summary

    Official Symbol
    Krtap17-1provided by MGI
    Official Full Name
    keratin associated protein 17-1provided by MGI
    Primary source
    MGI:MGI:1925164
    See related
    Ensembl:ENSMUSG00000078252 AllianceGenome:MGI:1925164
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    A030006P16Rik
    Summary
    Is expressed in several structures, including foregut; male reproductive gland or organ; respiratory system; thymus; and urinary system. Orthologous to human KRTAP17-1 (keratin associated protein 17-1). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    NEW
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    Genomic context

    Location:
    11 D; 11 63.34 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (99884058..99884820, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (99993232..99993994, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene keratin associated protein 29-1 Neighboring gene keratin associated protein 16-1 Neighboring gene STARR-seq mESC enhancer starr_30710 Neighboring gene keratin 33A Neighboring gene keratin 33B

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    General gene information

    Markers

    Clone Names

    • A030006P16Rik

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    keratin-associated protein 17-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001099774.2NP_001093244.1  keratin-associated protein 17-1

      See identical proteins and their annotated locations for NP_001093244.1

      Status: VALIDATED

      Source sequence(s)
      AL592545
      Consensus CDS
      CCDS36330.1
      UniProtKB/TrEMBL
      A2A5X6
      Related
      ENSMUSP00000100670.2, ENSMUST00000105049.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      99884058..99884820 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)