U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    RPUSD1 RNA pseudouridylate synthase domain containing 1 [ Gallus gallus (chicken) ]

    Gene ID: 771031, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Symbol
    RPUSD1provided by CGNC
    Full Name
    RNA pseudouridylate synthase domain containing 1provided by CGNC
    Primary source
    CGNC:3956
    See related
    Ensembl:ENSGALG00010018513
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 14
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (5995460..5998957)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (5990900..5994381)

    Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC416530 Neighboring gene G protein subunit gamma 13 Neighboring gene chromosome transmission fidelity factor 18 Neighboring gene mesothelin-like Neighboring gene mesothelin Neighboring gene nuclear prelamin A recognition factor like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pseudouridine synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in pseudouridine synthesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    RNA pseudouridylate synthase domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5995460..5998957
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003642118.5 → XP_003642166.2  RNA pseudouridylate synthase domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      cd02869
      Location:39 → 234
      PseudoU_synth_RluA_like; Pseudouridine synthase, RluA family

    2. XM_040647608.2 → XP_040503542.1  RNA pseudouridylate synthase domain-containing protein 1 isoform X4

      Conserved Domains (1) summary
      cd02869
      Location:87 → 197
      PseudoU_synth_RluA_like; Pseudouridine synthase, RluA family

    3. XM_004945220.5 → XP_004945277.1  RNA pseudouridylate synthase domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      E1C0L7
      Related
      ENSGALP00010026709.1, ENSGALT00010044787.1
      Conserved Domains (1) summary
      cd02869
      Location:18 → 213
      PseudoU_synth_RluA_like; Pseudouridine synthase, RluA family

    4. XM_046900944.1 → XP_046756900.1  RNA pseudouridylate synthase domain-containing protein 1 isoform X3

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      5990900..5994381
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040683585.2 → XP_040539519.1  RNA pseudouridylate synthase domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      cd02869
      Location:39 → 234
      PseudoU_synth_RluA_like; Pseudouridine synthase, RluA family

    2. XM_040683586.2 → XP_040539520.1  RNA pseudouridylate synthase domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      E1C0L7
      Conserved Domains (1) summary
      cd02869
      Location:18 → 213
      PseudoU_synth_RluA_like; Pseudouridine synthase, RluA family

    3. XM_046927887.1 → XP_046783843.1  RNA pseudouridylate synthase domain-containing protein 1 isoform X3

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Miscellaneous