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    tmem229b transmembrane protein 229B [ Danio rerio (zebrafish) ]

    Gene ID: 767735, updated on 27-Mar-2024

    Summary

    Official Symbol
    tmem229bprovided by ZNC
    Official Full Name
    transmembrane protein 229Bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060929-1154
    See related
    Ensembl:ENSDARG00000060569 AllianceGenome:ZFIN:ZDB-GENE-060929-1154
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:153098
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in cranial ganglion; epiphysis; hatching gland; hindbrain; and neurons. Orthologous to human TMEM229B (transmembrane protein 229B). [provided by Alliance of Genome Resources, Apr 2022]
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
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    Genomic context

    See tmem229b in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (37645633..37649828)
    105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (37698048..37702243)

    Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene cysteine-rich protein 2 Neighboring gene metastasis associated 1 Neighboring gene zinc finger protein 36, C3H type-like 1a Neighboring gene uncharacterized LOC103909058

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC153098

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076673.2NP_001070141.1  transmembrane protein 229b

      See identical proteins and their annotated locations for NP_001070141.1

      Status: VALIDATED

      Source sequence(s)
      BX537351
      UniProtKB/Swiss-Prot
      Q08CG9
      Related
      ENSDARP00000079935.4, ENSDART00000085500.6
      Conserved Domains (1) summary
      pfam06541
      Location:17138
      ABC_trans_CmpB; Putative ABC-transporter type IV

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007128.7 Reference GRCz11 Primary Assembly

      Range
      37645633..37649828
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)