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    PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 743348, updated on 29-Mar-2024

    Summary

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    Official Symbol
    PPWD1provided by VGNC
    Official Full Name
    peptidylprolyl isomerase domain and WD repeat containing 1provided by VGNC
    Primary source
    VGNC:VGNC:4135
    Locus tag
    CK820_G0034285
    See related
    Ensembl:ENSPTRG00000016930
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 4 NC_072402.2 (49051881..49075756, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (49466979..49490810, complement)

    Chromosome 4 - NC_072402.2Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 13 Neighboring gene U6 spliceosomal RNA Neighboring gene tripartite motif containing 23 Neighboring gene shieldin complex subunit 3 Neighboring gene centromere protein K Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 6 Neighboring gene large ribosomal subunit protein uL18-like Neighboring gene CWC27 spliceosome associated cyclophilin Neighboring gene uncharacterized LOC107974724

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptidyl-prolyl cis-trans isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein peptidyl-prolyl isomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptidylprolyl isomerase domain and WD repeat-containing protein 1
    XP_001164029.1
    XP_001164190.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      49051881..49075756 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001164029.7 → XP_001164029.1  peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A2I3TPE7, A0A2J8L192, A0A6D2XCJ1
      Related
      ENSPTRP00000091116.1
      Conserved Domains (3) summary
      cd01927
      Location:465 → 613
      cyclophilin_WD40; cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain. This group consists of several hypothetical and putative eukaryotic and bacterial proteins which have a cyclophilin domain and a WD40 domain. ...
      sd00039
      Location:106 → 147
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:59 → 288
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_001164190.7 → XP_001164190.1  peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A2J8L1A0, A0A6D2XWD4, H2QQZ6
      Related
      ENSPTRP00000028983.2
      Conserved Domains (3) summary
      cd01927
      Location:495 → 643
      cyclophilin_WD40; cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain. This group consists of several hypothetical and putative eukaryotic and bacterial proteins which have a cyclophilin domain and a WD40 domain. ...
      sd00039
      Location:136 → 177
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:89 → 318
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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