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    PYDC1 pyrin domain containing 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 742490, updated on 29-Mar-2024

    Summary

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    Official Symbol
    PYDC1provided by VGNC
    Official Full Name
    pyrin domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:9099
    Locus tag
    CK820_G0050588
    See related
    Ensembl:ENSPTRG00000008041
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human all
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    Genomic context

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    Location:
    chromosome: 16
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 18 NC_072416.2 (35245101..35246272, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 16 NC_072414.1 (35244997..35246444, complement)

    Chromosome 18 - NC_072416.2Genomic Context describing neighboring genes Neighboring gene FUS RNA binding protein Neighboring gene PYD and CARD domain containing Neighboring gene tripartite motif containing 72 Neighboring gene integrin subunit alpha M Neighboring gene integrin subunit alpha X

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    pyrin domain-containing protein 1
    Names
    PYD (pyrin domain) containing 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072416.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      35245101..35246272 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001158748.5 → XP_001158748.1  pyrin domain-containing protein 1

      See identical proteins and their annotated locations for XP_001158748.1

      UniProtKB/TrEMBL
      A0A2J8J556, A0A6D2XF19, H2QB01
      Related
      ENSPTRP00000013736.2
      Conserved Domains (1) summary
      cd08321
      Location:5 → 87
      Pyrin_ASC-like; Pyrin Death Domain found in ASC
    Nucleotide Protein
    Heading Accession and Version

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