U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    hhla2 HHLA2 member of B7 family [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 734131, updated on 16-Mar-2024

    Summary

    Official Symbol
    hhla2provided by Xenbase
    Official Full Name
    HHLA2 member of B7 familyprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-999098
    See related
    Ensembl:ENSXETG00000016135
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See hhla2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (103592191..103601871)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (99980851..99990560)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene Cbl proto-oncogene B, E3 ubiquitin protein ligase Neighboring gene bobby sox homolog Neighboring gene intraflagellar transport 57 Neighboring gene myosin heavy chain 15

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    HERV-H LTR-associating protein 2
    Names
    HERV-H LTR-associating 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001128644.1NP_001122116.1  HERV-H LTR-associating protein 2

      See identical proteins and their annotated locations for NP_001122116.1

      Status: PROVISIONAL

      Source sequence(s)
      BC167398
      UniProtKB/TrEMBL
      A0A6I8Q1L4, B3DLC9
      Related
      ENSXETP00000061365.3, ENSXETT00000063922.3
      Conserved Domains (2) summary
      smart00410
      Location:30132
      IG_like; Immunoglobulin like
      cl11960
      Location:38133
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      103592191..103601871
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)