Pxdc1 PX domain containing 1 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Pxdc1provided by MGI
Official Full Name: PX domain containing 1provided by MGI
Primary source: MGI:MGI:1914145
See related: Ensembl:ENSMUSG00000021411 AllianceGenome:MGI:1914145
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: 1300014I06Rik
Summary: Predicted to enable phosphatidylinositol binding activity. Orthologous to human PXDC1 (PX domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Broad expression in lung adult (RPKM 56.2), small intestine adult (RPKM 31.4) and 20 other tissues See more
Orthologs: human all
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Genomic context

Location:: 13 A3.3; 13 14.16 cM

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	13	NC_000079.7 (34811823..34836664, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	13	NC_000079.6 (34627840..34652681, complement)

Chromosome 13 - NC_000079.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Targeted (3)
Endonuclease-mediated (2)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info
enables phosphatidylinositol binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: PX domain-containing protein 1

Names: PX domain-containing protein C6orf145 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001382845.1 → NP_001369774.1 PX domain-containing protein 1 isoform 1

Status: VALIDATED

Source sequence(s)

AC124687

Conserved Domains (1) summary

cl02563
Location:45 → 127

PX_domain; The Phox Homology domain, a phosphoinositide binding module
NM_025831.3 → NP_080107.3 PX domain-containing protein 1 isoform 2

See identical proteins and their annotated locations for NP_080107.3

Status: VALIDATED

Source sequence(s)

AC124687, AK005003

Consensus CDS

CCDS36632.1

UniProtKB/Swiss-Prot

A0PJ93, Q8JZU6, Q9DBE6

Related

ENSMUSP00000051246.8, ENSMUST00000053459.15

Conserved Domains (1) summary

cl02563
Location:45 → 127

PX_domain; The Phox Homology domain, a phosphoinositide binding module