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    RNF207 ring finger protein 207 [ Bos taurus (cattle) ]

    Gene ID: 616057, updated on 3-Apr-2024

    Summary

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    Official Symbol
    RNF207provided by VGNC
    Official Full Name
    ring finger protein 207provided by VGNC
    Primary source
    VGNC:VGNC:34048
    See related
    BGD:BT14787; Ensembl:ENSBTAG00000009075
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RNF207 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (47120163..47137137, complement)

    Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 153 Neighboring gene hes family bHLH transcription factor 3 Neighboring gene isoprenylcysteine carboxyl methyltransferase Neighboring gene ribosomal protein L22 Neighboring gene chromodomain helicase DNA binding protein 5 Neighboring gene transfer RNA alanine (anticodon UGC)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC152241

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Hsp70 protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane transporter binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cardiac muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of heart looping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in perinuclear region of cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RING finger protein 207

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001078057.1 → NP_001071525.1  RING finger protein 207

      See identical proteins and their annotated locations for NP_001071525.1

      Status: PROVISIONAL

      Source sequence(s)
      BC126674
      UniProtKB/Swiss-Prot
      A0JNG4, Q08D80
      UniProtKB/TrEMBL
      A0A3Q1LZS2
      Related
      ENSBTAP00000034008.5, ENSBTAT00000034107.5
      Conserved Domains (2) summary
      cd00162
      Location:25 → 65
      RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
      pfam00643
      Location:100 → 145
      zf-B_box; B-box zinc finger

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      47120163..47137137 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059875543.1 → XP_059731526.1  RING finger protein 207 isoform X5

      UniProtKB/Swiss-Prot
      A0JNG4, Q08D80
      Related
      ENSBTAP00000062843.2, ENSBTAT00000070395.2

    2. XM_059875542.1 → XP_059731525.1  RING finger protein 207 isoform X3

    3. XM_059875541.1 → XP_059731524.1  RING finger protein 207 isoform X2

    4. XM_005217121.5 → XP_005217178.2  RING finger protein 207 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1LZS2
      Conserved Domains (2) summary
      pfam00643
      Location:93 → 145
      zf-B_box; B-box zinc finger
      cl17238
      Location:22 → 64
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    5. XM_005217119.5 → XP_005217176.2  RING finger protein 207 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LZS2, A0A3Q1M758
      Conserved Domains (3) summary
      pfam00643
      Location:93 → 145
      zf-B_box; B-box zinc finger
      cd16558
      Location:22 → 64
      RING-HC_RNF207; RING finger, HC subclass, found in RING finger protein 207 (RNF207) and similar proteins
      cl25732
      Location:404 → 600
      SMC_N; RecF/RecN/SMC N terminal domain

    RNA

    1. XR_003029624.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0JNG4.1 GenPept UniProtKB/Swiss-Prot:A0JNG4

    Gene LinkOut

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