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    SCAI suppressor of cancer cell invasion [ Canis lupus familiaris (dog) ]

    Gene ID: 612887, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SCAIprovided by VGNC
    Official Full Name
    suppressor of cancer cell invasionprovided by VGNC
    Primary source
    VGNC:VGNC:111712
    See related
    Ensembl:ENSCAFG00845009946
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SCAI in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (58845385..59011277)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (57124828..57289680)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (58011467..58176812)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (57604632..57770289)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (57921148..58086095)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L27a-like Neighboring gene mitochondrial import inner membrane translocase subunit TIM14-like Neighboring gene protein phosphatase 6 catalytic subunit Neighboring gene 40S ribosomal protein S20-like Neighboring gene golgin A1 Neighboring gene actin related protein 2/3 complex subunit 5 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein SCAI; LOW QUALITY PROTEIN: protein SCAI

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      58845385..59011277
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038678607.1 → XP_038534535.1  protein SCAI isoform X1

      UniProtKB/TrEMBL
      A0A8C0MDU3, A0A8C0TEP2
      Related
      ENSCAFP00845013614.1, ENSCAFT00845017490.1
      Conserved Domains (1) summary
      pfam12070
      Location:64 → 557
      SCAI; Protein SCAI

    2. XM_038678609.1 → XP_038534537.1  protein SCAI isoform X2

      UniProtKB/TrEMBL
      A0A8C0R1Y4
      Conserved Domains (1) summary
      pfam12070
      Location:43 → 536
      SCAI; Protein SCAI

    3. XM_038678608.1 → XP_038534536.1  protein SCAI isoform X2

      UniProtKB/TrEMBL
      A0A8C0R1Y4
      Conserved Domains (1) summary
      pfam12070
      Location:43 → 536
      SCAI; Protein SCAI

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      57604632..57770289
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038487441.1 → XP_038343369.1  LOW QUALITY PROTEIN: protein SCAI isoform X1

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      57921148..58086095
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038613316.1 → XP_038469244.1  protein SCAI isoform X1

      Conserved Domains (1) summary
      pfam12070
      Location:64 → 557
      SCAI; Protein SCAI

    2. XM_038613318.1 → XP_038469246.1  protein SCAI isoform X2

      Conserved Domains (1) summary
      pfam12070
      Location:43 → 536
      SCAI; Protein SCAI

    3. XM_038613317.1 → XP_038469245.1  protein SCAI isoform X2

      Conserved Domains (1) summary
      pfam12070
      Location:43 → 536
      SCAI; Protein SCAI

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      58011467..58176812
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038549373.1 → XP_038405301.1  protein SCAI isoform X1

      UniProtKB/TrEMBL
      A0A8C0MDU3, A0A8C0TEP2
      Conserved Domains (1) summary
      pfam12070
      Location:64 → 557
      SCAI; Protein SCAI

    2. XM_038549375.1 → XP_038405303.1  protein SCAI isoform X2

      UniProtKB/TrEMBL
      A0A8C0R1Y4
      Conserved Domains (1) summary
      pfam12070
      Location:43 → 536
      SCAI; Protein SCAI

    3. XM_038549374.1 → XP_038405302.1  protein SCAI isoform X2

      UniProtKB/TrEMBL
      A0A8C0R1Y4
      Conserved Domains (1) summary
      pfam12070
      Location:43 → 536
      SCAI; Protein SCAI

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      57124828..57289680
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_846887.6 → XP_851980.2  protein SCAI isoform X1

      See identical proteins and their annotated locations for XP_851980.2

      UniProtKB/TrEMBL
      A0A8C0MDU3, A0A8C0TEP2
      Conserved Domains (1) summary
      pfam12070
      Location:64 → 557
      SCAI; Protein SCAI

    2. XM_022423833.2 → XP_022279541.1  protein SCAI isoform X2

      UniProtKB/TrEMBL
      A0A8C0R1Y4
      Conserved Domains (1) summary
      pfam12070
      Location:43 → 536
      SCAI; Protein SCAI

    3. XM_022423832.2 → XP_022279540.1  protein SCAI isoform X2

      UniProtKB/TrEMBL
      A0A8C0R1Y4
      Conserved Domains (1) summary
      pfam12070
      Location:43 → 536
      SCAI; Protein SCAI
    Nucleotide Protein
    Heading Accession and Version

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