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    SAMD12 sterile alpha motif domain containing 12 [ Canis lupus familiaris (dog) ]

    Gene ID: 608931, updated on 11-Apr-2024

    Summary

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    Official Symbol
    SAMD12provided by VGNC
    Official Full Name
    sterile alpha motif domain containing 12provided by VGNC
    Primary source
    VGNC:VGNC:49882
    See related
    Ensembl:ENSCAFG00845014607
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SAMD12 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (17813622..18191246, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (17524208..17898719, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (17897028..18274675, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (17552401..17946810, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (17651658..18029189, complement)

    Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119864269 Neighboring gene exostosin glycosyltransferase 1 Neighboring gene uncharacterized LOC119865399 Neighboring gene uncharacterized LOC111098532 Neighboring gene uncharacterized LOC119865400 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sterile alpha motif domain-containing protein 12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051817.1 Reference ROS_Cfam_1.0

      Range
      17813622..18191246 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038684899.1 → XP_038540827.1  sterile alpha motif domain-containing protein 12 isoform X1

      UniProtKB/TrEMBL
      A0A8C0JT75, A0A8C0MBE9, A0A8C0S2H3, A0A8I3NIR3, A0A8I3S0Z6
      Related
      ENSCAFP00845020601.1, ENSCAFT00845026132.1
      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    2. XM_038684900.1 → XP_038540828.1  sterile alpha motif domain-containing protein 12 isoform X2

      UniProtKB/TrEMBL
      A0A8I3NRB1, A0A8P0NWN6
      Related
      ENSCAFP00845020618.1, ENSCAFT00845026156.1
      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    3. XM_038684901.1 → XP_038540829.1  sterile alpha motif domain-containing protein 12 isoform X3

      UniProtKB/TrEMBL
      A0A8I3NRB1, A0A8I3NV15, A0A8P0NWN6, A0A8P0TEZ8
      Related
      ENSCAFP00845020608.1, ENSCAFT00845026144.1
      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    RNA

    1. XR_005436328.1 RNA Sequence

    2. XR_005436330.1 RNA Sequence

    3. XR_005436327.1 RNA Sequence

    4. XR_005436329.1 RNA Sequence

    5. XR_005436326.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049273.1 Alternate UMICH_Zoey_3.1

      Range
      17552401..17946810 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038493117.1 → XP_038349045.1  sterile alpha motif domain-containing protein 12 isoform X1

      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    2. XM_038493118.1 → XP_038349046.1  sterile alpha motif domain-containing protein 12 isoform X2

      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    3. XM_038493119.1 → XP_038349047.1  sterile alpha motif domain-containing protein 12 isoform X3

      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    RNA

    1. XR_005334844.1 RNA Sequence

    2. XR_005334846.1 RNA Sequence

    3. XR_005334843.1 RNA Sequence

    4. XR_005334845.1 RNA Sequence

    5. XR_005334842.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

      Range
      17651658..18029189 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038619284.1 → XP_038475212.1  sterile alpha motif domain-containing protein 12 isoform X1

      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    2. XM_038619285.1 → XP_038475213.1  sterile alpha motif domain-containing protein 12 isoform X2

      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    3. XM_038619286.1 → XP_038475214.1  sterile alpha motif domain-containing protein 12 isoform X3

      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    RNA

    1. XR_005402880.1 RNA Sequence

    2. XR_005402882.1 RNA Sequence

    3. XR_005402879.1 RNA Sequence

    4. XR_005402881.1 RNA Sequence

    5. XR_005402878.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

      Range
      17897028..18274675 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038555387.1 → XP_038411315.1  sterile alpha motif domain-containing protein 12 isoform X1

      UniProtKB/TrEMBL
      A0A8C0JT75, A0A8C0MBE9, A0A8C0S2H3, A0A8I3NIR3, A0A8I3S0Z6
      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    2. XM_038555388.1 → XP_038411316.1  sterile alpha motif domain-containing protein 12 isoform X2

      UniProtKB/TrEMBL
      A0A8I3NRB1, A0A8P0NWN6
      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    3. XM_038555389.1 → XP_038411317.1  sterile alpha motif domain-containing protein 12 isoform X3

      UniProtKB/TrEMBL
      A0A8I3NRB1, A0A8I3NV15, A0A8P0NWN6, A0A8P0TEZ8
      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    RNA

    1. XR_005368575.1 RNA Sequence

    2. XR_005368578.1 RNA Sequence

    3. XR_005368574.1 RNA Sequence

    4. XR_005368576.1 RNA Sequence

    5. XR_005368573.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      17524208..17898719 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022426667.2 → XP_022282375.1  sterile alpha motif domain-containing protein 12 isoform X1

      UniProtKB/TrEMBL
      A0A8C0JT75, A0A8C0MBE9, A0A8C0S2H3, A0A8I3NIR3, A0A8I3S0Z6
      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    2. XM_022426668.2 → XP_022282376.1  sterile alpha motif domain-containing protein 12 isoform X2

      UniProtKB/TrEMBL
      A0A8I3NRB1, A0A8P0NWN6
      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    3. XM_022426669.2 → XP_022282377.1  sterile alpha motif domain-containing protein 12 isoform X3

      UniProtKB/TrEMBL
      A0A8I3NRB1, A0A8I3NV15, A0A8P0NWN6, A0A8P0TEZ8
      Conserved Domains (1) summary
      cd09510
      Location:72 → 146
      SAM_aveugle-like; SAM domain of aveugle-like subfamily

    RNA

    1. XR_002632394.2 RNA Sequence

    2. XR_005300169.1 RNA Sequence

    3. XR_002632395.2 RNA Sequence

    4. XR_002632396.2 RNA Sequence

    5. XR_001317500.3 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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