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    VOPP1 VOPP1 WW domain binding protein [ Canis lupus familiaris (dog) ]

    Gene ID: 608562, updated on 5-Mar-2024

    Summary

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    Official Symbol
    VOPP1provided by VGNC
    Official Full Name
    VOPP1 WW domain binding proteinprovided by VGNC
    Primary source
    VGNC:VGNC:54387
    See related
    Ensembl:ENSCAFG00845011646
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 18
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 18 NC_051822.1 (6324333..6429496, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 18 NC_006600.4 (6127459..6232357, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 18 NC_049239.1 (6394579..6499861, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 18 NC_049278.1 (6314150..6419178, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 18 NC_049759.1 (6288335..6387218, complement)

    Chromosome 18 - NC_051822.1Genomic Context describing neighboring genes Neighboring gene glutathione peroxidase 1-like Neighboring gene uncharacterized LOC111090799 Neighboring gene uncharacterized LOC119864157 Neighboring gene uncharacterized LOC111090864 Neighboring gene biliverdin reductase A Neighboring gene cytochrome c oxidase assembly factor 1 Neighboring gene serine/threonine kinase 17a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytoplasmic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vesicular, overexpressed in cancer, prosurvival protein 1
    Names
    VOPP1, WBP1/VOPP1 family member

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051822.1 Reference ROS_Cfam_1.0

      Range
      6324333..6429496 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038423678.1 → XP_038279606.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0LCB5, A0A8C0QDU9, A0A8C0RDU6
      Related
      ENSCAFP00845016306.1, ENSCAFT00845020784.1
      Conserved Domains (1) summary
      cl28929
      Location:107 → 163
      VirB10_like; VirB10 and similar proteins form part of core complex in Type IV secretion system (T4SS)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049278.1 Alternate UMICH_Zoey_3.1

      Range
      6314150..6419178 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038500045.1 → XP_038355973.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X1

      Conserved Domains (1) summary
      cl28929
      Location:107 → 163
      VirB10_like; VirB10 and similar proteins form part of core complex in Type IV secretion system (T4SS)

    2. XM_038500046.1 → XP_038355974.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X2

      Conserved Domains (1) summary
      cl28929
      Location:38 → 96
      VirB10_like; VirB10 and similar proteins form part of core complex in Type IV secretion system (T4SS)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049759.1 Alternate UNSW_CanFamBas_1.0

      Range
      6288335..6387218 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038626707.1 → XP_038482635.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X1

    2. XM_038626708.1 → XP_038482636.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X3

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049239.1 Alternate UU_Cfam_GSD_1.0

      Range
      6394579..6499861 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038562627.1 → XP_038418555.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0LCB5, A0A8C0QDU9, A0A8C0RDU6
      Conserved Domains (1) summary
      cl28929
      Location:107 → 163
      VirB10_like; VirB10 and similar proteins form part of core complex in Type IV secretion system (T4SS)

    2. XM_038562628.1 → XP_038418556.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0QGH3, A0A8I3NG72
      Conserved Domains (1) summary
      cl28929
      Location:38 → 96
      VirB10_like; VirB10 and similar proteins form part of core complex in Type IV secretion system (T4SS)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006600.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      6127459..6232357 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038453898.1 → XP_038309826.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0LCB5, A0A8C0QDU9, A0A8C0RDU6
      Conserved Domains (1) summary
      cl28929
      Location:107 → 163
      VirB10_like; VirB10 and similar proteins form part of core complex in Type IV secretion system (T4SS)
    Nucleotide Protein
    Heading Accession and Version

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