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    nrm nurim [ Danio rerio (zebrafish) ]

    Gene ID: 570027, updated on 27-Mar-2024

    Summary

    Official Symbol
    nrmprovided by ZNC
    Official Full Name
    nurimprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060503-445
    See related
    Ensembl:ENSDARG00000063690 AllianceGenome:ZFIN:ZDB-GENE-060503-445
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:dkey-263h23.2
    Summary
    Predicted to be located in nuclear envelope. Predicted to be active in nuclear membrane. Orthologous to human NRM (nurim). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    NEW
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    Genomic context

    Location:
    chromosome: 19
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (816214..819259)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (816405..819450)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein 79a Neighboring gene glycosylated lysosomal membrane protein Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene protein phosphatase 1, regulatory subunit 18 Neighboring gene eomesodermin homolog a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nuclear envelope ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in nuclear inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nuclear membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    nurim
    Names
    nuclear envelope membrane protein
    nuclear rim protein
    nurim (nuclear envelope membrane protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001045195.1NP_001038660.1  nurim

      See identical proteins and their annotated locations for NP_001038660.1

      Status: PROVISIONAL

      Source sequence(s)
      CR391989
      UniProtKB/Swiss-Prot
      Q1L911
      Related
      ENSDARP00000087736.5, ENSDART00000093304.6

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      816214..819259
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)