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    ppp1r27b protein phosphatase 1, regulatory subunit 27b [ Danio rerio (zebrafish) ]

    Gene ID: 559662, updated on 27-Mar-2024

    Summary

    Official Symbol
    ppp1r27bprovided by ZNC
    Official Full Name
    protein phosphatase 1, regulatory subunit 27bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-051023-5
    See related
    Ensembl:ENSDARG00000100504 AllianceGenome:ZFIN:ZDB-GENE-051023-5
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    dysfip1; ppp1r27; zgc:123237
    Summary
    Predicted to enable phosphatase binding activity. Orthologous to human PPP1R27 (protein phosphatase 1 regulatory subunit 27). [provided by Alliance of Genome Resources, Apr 2022]
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
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    Genomic context

    Location:
    chromosome: 6
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (18197802..18199062, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (21726481..21727741, complement)

    Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene si:dkey-237i9.1 Neighboring gene platelet and endothelial cell adhesion molecule 1b Neighboring gene prolyl 4-hydroxylase, beta polypeptide Neighboring gene APC11 anaphase promoting complex subunit 11 homolog (yeast)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC123237

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables phosphatase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    protein phosphatase 1 regulatory subunit 27b
    Names
    dysferlin interacting protein 1
    protein phosphatase 1, regulatory subunit 27

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037104.2NP_001032181.2  protein phosphatase 1 regulatory subunit 27b

      Status: VALIDATED

      Source sequence(s)
      BX005286
      Related
      ENSDARP00000135176.1, ENSDART00000167513.2

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007117.7 Reference GRCz11 Primary Assembly

      Range
      18197802..18199062 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394636.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      86705..87965 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)