sumo2 small ubiquitin-like modifier 2 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: sumo2provided by Xenbase
Official Full Name: small ubiquitin-like modifier 2provided by Xenbase
Primary source: Xenbase:XB-GENE-969139
See related: Ensembl:ENSXETG00000012516
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: hsmt3; smt3b; smt3h2; sumo2-a; sumo2-b
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	10	NC_030686.2 (44412401..44420330)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	10	NC_030686.1 (35819117..35826807)

Chromosome 10 - NC_030686.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables protein tag activity	IBA Inferred from Biological aspect of Ancestor more info
enables ubiquitin-like protein ligase binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in protein sumoylation	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: small ubiquitin-related modifier 2

Names: SMT3 suppressor of mif two 3 homolog 2; SUMO-2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001016406.2 → NP_001016406.1 small ubiquitin-related modifier 2

See identical proteins and their annotated locations for NP_001016406.1

Status: PROVISIONAL

Source sequence(s)

CR761130

UniProtKB/Swiss-Prot

Q28H04

UniProtKB/TrEMBL

A0A6I8PXW8

Related

ENSXETP00000027383.3, ENSXETT00000027383.5

Conserved Domains (1) summary

cd16115
Location:17 → 88

Ubl_SUMO2_3_4; ubiquitin-like (Ubl) domain found in small ubiquitin-related modifier SUMO-2, SUMO-3, SUMO-4, and similar proteins