U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    PTPRD protein tyrosine phosphatase receptor type D [ Bos taurus (cattle) ]

    Gene ID: 532751, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PTPRDprovided by VGNC
    Official Full Name
    protein tyrosine phosphatase receptor type Dprovided by VGNC
    Primary source
    VGNC:VGNC:33548
    See related
    BGD:BT28547; Ensembl:ENSBTAG00000010178
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 8
    Exon count:
    45
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 8 NC_037335.1 (34067405..36603746)

    Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene oocyte-secreted protein 1-like Neighboring gene serine/threonine-protein kinase Nek4-like Neighboring gene endogenous retrovirus group K member 113 Gag polyprotein-like Neighboring gene uncharacterized LOC132345942 Neighboring gene uncharacterized LOC132346053 Neighboring gene microRNA mir-2285bg Neighboring gene uncharacterized LOC132345943 Neighboring gene uncharacterized LOC132346043 Neighboring gene distal membrane arm assembly component 1 Neighboring gene uncharacterized LOC132345945 Neighboring gene transfer RNA cysteine (anticodon GCA)

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037335.1 Chromosome 8 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    receptor-type tyrosine-protein phosphatase delta
    XP_059745394.1
    XP_059745395.1
    XP_059745396.1
    XP_059745397.1
    XP_059745398.1
    XP_059745399.1
    XP_059745400.1
    XP_059745401.1
    XP_059745402.1
    XP_059745403.1
    XP_059745404.1
    XP_059745405.1
    XP_059745406.1
    XP_059745407.1
    XP_059745408.1
    XP_059745409.1
    XP_059745410.1
    XP_059745411.1
    XP_059745412.1
    XP_059745413.1
    XP_059745414.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037335.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      34067405..36603746
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059889411.1 → XP_059745394.1  receptor-type tyrosine-protein phosphatase delta isoform X1

    2. XM_059889419.1 → XP_059745402.1  receptor-type tyrosine-protein phosphatase delta isoform X8

    3. XM_059889414.1 → XP_059745397.1  receptor-type tyrosine-protein phosphatase delta isoform X3

    4. XM_059889413.1 → XP_059745396.1  receptor-type tyrosine-protein phosphatase delta isoform X2

    5. XM_059889420.1 → XP_059745403.1  receptor-type tyrosine-protein phosphatase delta isoform X9

    6. XM_059889415.1 → XP_059745398.1  receptor-type tyrosine-protein phosphatase delta isoform X4

    7. XM_059889417.1 → XP_059745400.1  receptor-type tyrosine-protein phosphatase delta isoform X6

    8. XM_059889421.1 → XP_059745404.1  receptor-type tyrosine-protein phosphatase delta isoform X10

    9. XM_059889418.1 → XP_059745401.1  receptor-type tyrosine-protein phosphatase delta isoform X7

    10. XM_059889422.1 → XP_059745405.1  receptor-type tyrosine-protein phosphatase delta isoform X11

    11. XM_059889424.1 → XP_059745407.1  receptor-type tyrosine-protein phosphatase delta isoform X13

    12. XM_059889427.1 → XP_059745410.1  receptor-type tyrosine-protein phosphatase delta isoform X16

    13. XM_059889425.1 → XP_059745408.1  receptor-type tyrosine-protein phosphatase delta isoform X14

      Related
      ENSBTAP00000013433.7, ENSBTAT00000013433.7

    14. XM_059889428.1 → XP_059745411.1  receptor-type tyrosine-protein phosphatase delta isoform X17

      Related
      ENSBTAP00000069929.2, ENSBTAT00000080019.2

    15. XM_059889426.1 → XP_059745409.1  receptor-type tyrosine-protein phosphatase delta isoform X15

    16. XM_059889416.1 → XP_059745399.1  receptor-type tyrosine-protein phosphatase delta isoform X5

    17. XM_059889430.1 → XP_059745413.1  receptor-type tyrosine-protein phosphatase delta isoform X19

    18. XM_059889423.1 → XP_059745406.1  receptor-type tyrosine-protein phosphatase delta isoform X12

    19. XM_059889429.1 → XP_059745412.1  receptor-type tyrosine-protein phosphatase delta isoform X18

      Related
      ENSBTAP00000068307.2, ENSBTAT00000066459.2

    20. XM_059889431.1 → XP_059745414.1  receptor-type tyrosine-protein phosphatase delta isoform X20

    21. XM_059889412.1 → XP_059745395.1  receptor-type tyrosine-protein phosphatase delta isoform X1

      Related
      ENSBTAP00000060709.2, ENSBTAT00000077125.2
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.