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    ATN1 atrophin 1 [ Bos taurus (cattle) ]

    Gene ID: 513125, updated on 5-Mar-2024

    Summary

    Official Symbol
    ATN1provided by VGNC
    Official Full Name
    atrophin 1provided by VGNC
    Primary source
    VGNC:VGNC:26269
    See related
    BGD:BT12473; Ensembl:ENSBTAG00000018828
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    See ATN1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (103521298..103529979, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase non-receptor type 6 Neighboring gene chromosome 5 C12orf57 homolog Neighboring gene U7 small nuclear RNA Neighboring gene uncharacterized LOC132345344 Neighboring gene enolase 2 Neighboring gene leucine rich repeat containing 23

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    General protein information

    Preferred Names
    atrophin-1
    Names
    arginine-glutamic acid dipeptide (RE) repeats

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001205748.2NP_001192677.1  atrophin-1

      See identical proteins and their annotated locations for NP_001192677.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000005
      UniProtKB/TrEMBL
      F1MVN0
      Related
      ENSBTAP00000025063.4, ENSBTAT00000025063.5
      Conserved Domains (1) summary
      cl26464
      Location:11183
      Atrophin-1; Atrophin-1 family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      103521298..103529979 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005207134.5XP_005207191.1  atrophin-1 isoform X1

      Conserved Domains (1) summary
      pfam03154
      Location:11182
      Atrophin-1; Atrophin-1 family